PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1122501g011
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bHLH
Protein Properties Length: 201aa    MW: 22615.6 Da    PI: 5.9751
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1122501g011genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.23e-082166555
                        HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                        h +rEr+RR+r+ ++++ Lr +l ++      K +K ++++ A  Y+k+L+
  PDK_30s1122501g011 21 HLMRERQRRERLSQGYADLRYMLSNR-----SKGDKNSVVQAAAVYLKELE 66
                        789**********************7.....689999999******99985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000838.28E-61466No hitNo description
SuperFamilySSF474592.75E-121582IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.2581665IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.5E-92085IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-52166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-62271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MATREESFRG VVAEGSREFR HLMRERQRRE RLSQGYADLR YMLSNRSKGD KNSVVQAAAV  60
YLKELEGVRE ELQKRNEELE ETAAGKRGVV EGATIKLRVM NPSSAVDSMM GALQCLRGME  120
LAAASMQAEL RSDELSAVVN LKSKNVAIAE VERAMECALE EAEKKSHTLS SQQYKCSEEE  180
EGEREEEEAT PKSKMGKRVR P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12530RQRRER
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008786099.11e-122transcription factor BHLH148-like
TrEMBLA0A2H3XN551e-120A0A2H3XN55_PHODC; transcription factor BHLH148-like
STRINGXP_008786099.11e-121(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP59403450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.14e-08bHLH family protein