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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PDK_30s1111671g005 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family |
ERF |
Protein Properties |
Length: 364aa MW: 40415 Da PI: 5.2787 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PDK_30s1111671g005 | genome | PDK | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.6 | 1.5e-18 | 127 | 176 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+G+r+++ +g+W+AeIrdp + r++lg+f taeeAa+a++ +++++g
PDK_30s1111671g005 127 QYRGIRQRP-WGKWAAEIRDPH----KgVRVWLGTFNTAEEAARAYDVEARRIRG 176
69*******.**********72....35************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0070483 | Biological Process | detection of hypoxia |
GO:0005634 | Cellular Component | nucleus |
GO:0005886 | Cellular Component | plasma membrane |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MCGGAIIADL RPVGTRRLTA DHLWPALKKG ADNGGRRTGR KHEVKGGGGG GKKKGRKQEV 60 VEFDDDFEAD FEDFKDESEE DEEEEIDVKP SAFVSKAPFS GEGSTTLKSV EFNGCAARST 120 KRKRKNQYRG IRQRPWGKWA AEIRDPHKGV RVWLGTFNTA EEAARAYDVE ARRIRGKKAK 180 VNFPEAPASA QKRNQKPTLQ APKPALSEEQ KSKPEYMNSL PLLESSPPSG GTGFLNFLSD 240 QGSNSIDCLD FGWEHETKNP EITSVLAPMI TEGDESRFLE HGRPQKNLKS QSGEAVPAEE 300 NSALKLSEEL SAYESYMKFL QIPYLEGSTY ESIDSLFSCE VAQDGLNPLN LWSFDDLPTE 360 SSIY
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