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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PDK_30s1100871g001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family |
Trihelix |
Protein Properties |
Length: 302aa MW: 33710.5 Da PI: 4.4316 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PDK_30s1100871g001 | genome | PDK | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 39.7 | 1.3e-12 | 63 | 137 | 2 | 78 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessst 78
Wt +e l+L+ ++e+ ++ + ++W+ +s+++ + + rs++qCk kwe+l +y +i+++e++ +++ s
PDK_30s1100871g001 63 WTTHEMLVLVSEIAAVDEDWVKALSSYQKWKMISDNCVAFDVIRSSNQCKRKWESLLADYWRIRDWESR--CGVGSY 137
*******************************************************************98..666555 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MERTETPCIV QALPASNKKD KESLTKPVTV EDKESPLKLE STTNSPQTPS SSRFTRSQAA 60 PDWTTHEMLV LVSEIAAVDE DWVKALSSYQ KWKMISDNCV AFDVIRSSNQ CKRKWESLLA 120 DYWRIRDWES RCGVGSYWCL EGEKRKQFGL PALFDEEVFD SMDAVIKAQE TQSSSRDSDS 180 EGLVGTADVQ MADGDDDLGS GEKEPNETLT NTDKGRDMAM KLQEDAQHIH AILKGELEDS 240 SSQVRAPVDL TKPNAIETEF TRRQANELIK AFGSLVSTLN QFTELIKDGE CEGIKPVTST 300 AQ
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT4G31270.1 | 4e-43 | sequence-specific DNA binding transcription factors |