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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PDK_30s1100061g004 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 201aa MW: 22198.2 Da PI: 9.4245 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s1100061g004 | genome | PDK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 60.2 | 3.3e-19 | 66 | 119 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+ +++keq + Lee F++n++++ +++e LA+kl+L rqV vWFqNrRa+ k
PDK_30s1100061g004 66 KKLRLSKEQSRLLEESFRQNHTLNPKQKEALAMKLKLRPRQVEVWFQNRRARTK 119
67789***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 120.2 | 1.1e-38 | 66 | 147 | 2 | 83 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLeke 83
kk+rlskeq++lLEesF+++++L+p++K++la +L+l+prqv+vWFqnrRARtk+kq+E+++e+Lkr++ +l+een+rL++e
PDK_30s1100061g004 66 KKLRLSKEQSRLLEESFRQNHTLNPKQKEALAMKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQRE 147
9*******************************************************************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 201 aa
Download sequence Send
to blast |
MAGFGGSASG LELTIAVPGL RTSTGYEGGG CNVRELDINQ PASGAEEDFP MGSVEEEEEG 60
GTPRPKKLRL SKEQSRLLEE SFRQNHTLNP KQKEALAMKL KLRPRQVEVW FQNRRARTKL 120
KQTEMECEYL KRCFGSLTEE NRRLQREPMP ASALTMCPRC ERLTSTPRAV AASAASAATA 180
TTSLPSAFPF RPRRHPSSAA C
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 113 | 121 | RRARTKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
| UniProt | Probable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
