PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1089221g009
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family TALE
Protein Properties Length: 673aa    MW: 73423 Da    PI: 6.9126
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1089221g009genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.45.7e-093844211954
                         HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
            Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                         Fe   ++yp+ +++  LAk++gLt +qV++WF N R +
  PDK_30s1089221g009 384 FEHflHPYPKDSDKLVLAKQTGLTRSQVSNWFINARVR 421
                         664459******************************88 PP
2BELL123.11.1e-39251322172
                BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                         erqe q+kkakL+++leeV++rY+qy++q+q+v+ssFe+vag+gsa+ Yt+lAl++iS++FrcL+dai++qi
  PDK_30s1089221g009 251 ERQEFQMKKAKLVNMLEEVEQRYRQYHHQMQIVVSSFEQVAGIGSARTYTALALQTISKQFRCLRDAITGQI 322
                         79*********************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005744.7E-64178320IPR006563POX domain
PfamPF075265.0E-51184319IPR006563POX domain
PROSITE profilePS5007111.953362425IPR001356Homeobox domain
SMARTSM003898.4E-9365429IPR001356Homeobox domain
CDDcd000866.20E-12365426No hitNo description
SuperFamilySSF466891.11E-16366432IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.7E-27368431IPR009057Homeodomain-like
PfamPF059202.3E-17382421IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009610Biological Processresponse to symbiotic fungus
GO:0009737Biological Processresponse to abscisic acid
GO:0010197Biological Processpolar nucleus fusion
GO:0010201Biological Processresponse to continuous far red light stimulus by the high-irradiance response system
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 673 aa     Download sequence    Send to blast
MATYFHGAPE FQADGLQTLY LMNPNYVGYS DTAAPANMIL LNSAMNSLNP VNLGHCAAMA  60
QPNQQQHLAG IPPQPTVASH ESNRLSFIQA SHDGSAIPLL HYDLWTPMAP NNSTDMASQL  120
GPRRTSAVPP QPQQGLSLSL SSQEMVAPVP EITLAGTEEA KILGSSSSAP GVANAAVSGL  180
QSFLMGSKYL KAAQQLLDEV VNVGQGIRGD STKGTNSKSP TKSNRESEAT GTGTGEEDKN  240
TKRGADLTTA ERQEFQMKKA KLVNMLEEVE QRYRQYHHQM QIVVSSFEQV AGIGSARTYT  300
ALALQTISKQ FRCLRDAITG QIQAASRSLG EEDSKSGGSR LRFVDHHLRQ QRALQQLGMI  360
QHNAWRPQRG LPERSVSILR AWLFEHFLHP YPKDSDKLVL AKQTGLTRSQ VSNWFINARV  420
RLWKPMVEEM YLEEMKDQEP SNTDEKGSKS NANENSISKS GANRENGSPT RTGQADGRRT  480
MQDNPNDPKP SAVAMPLSSL RNDQNHASYD DNEAAMHLDL KEARSDELLQ PNTMPHSISF  540
GMKSDEMSNR ELLMKFMDGR QRAGDQGFSL IAGNADHGGN LGAYPIAGIG RFDSEQFAPR  600
FPGNGGVSLT LGLPQCENFS LSGAQPPFLS NEGMASFNSN PSAAPAHPSS AYESIDIQSR  660
KRFAARLLPD FVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A1e-15371429563Homeobox protein Meis2
3k2a_B1e-15371429563Homeobox protein Meis2
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008799712.10.0BEL1-like homeodomain protein 1
RefseqXP_008799713.10.0BEL1-like homeodomain protein 1
RefseqXP_026663156.10.0BEL1-like homeodomain protein 1
TrEMBLA0A2H3YJL40.0A0A2H3YJL4_PHODC; BEL1-like homeodomain protein 1
STRINGXP_008799712.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48163758
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.31e-129BEL1-like homeodomain 1