PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1089221g003
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bZIP
Protein Properties Length: 340aa    MW: 37262.9 Da    PI: 6.7178
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1089221g003genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.64.6e-071952301449
                         HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1  14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                         R + +rsR RK+++i+eLe+ v++L++   +L+ ++
  PDK_30s1089221g003 195 RRSGQRSRVRKLQYIAELERTVDALQTLGAELAARV 230
                         67889*********************9988888554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0046186253IPR004827Basic-leucine zipper domain
CDDcd147034.47E-16193237No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-6195256No hitNo description
SuperFamilySSF579596.89E-5195238No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MSRPAHLPPR CPFQNRGLLP RALDSTPQTT LYRFPSQGSI IDEKLSWLDD LLTDSESSPR  60
GISHRRSSSD SAAVLDVLTT LGGPVSPVDE GNASSVCALH KPSESTDEDE SNSGLEAGSG  120
FEASCVYGPN SPRQKSKLTS SESSMVTALL ENVPWNPLQY VTVDFHSGSN SSESNVSGDV  180
LAATGDHDPE KAARRRSGQR SRVRKLQYIA ELERTVDALQ TLGAELAARV ASMYQQHFAL  240
SIENKKLRRQ ITILRQEKMM RDGQYQSLKS EAERLKMIYG CQRSLRSAAS CFEMGFSNAA  300
DISVRWVMDA IPTTVSAFGV IVGKLPEEMQ HMLGAMMHQP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1194200RRSGQRS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008799706.10.0basic leucine zipper 6
RefseqXP_008799707.10.0basic leucine zipper 6
TrEMBLA0A2H3YJV40.0A0A2H3YJV4_PHODC; basic leucine zipper 6
STRINGXP_008799706.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP81372631
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.26e-18bZIP family protein