PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s1083451g003

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

Dof

Protein Properties

Length: 290aa MW: 31104.7 Da PI: 7.9345

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s1083451g003	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	128.1	2.6e-40	32	93	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +e++lkcprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss PDK_30s1083451g003 32 PEQNLKCPRCDSTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNKRSSS 93 7899******************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.9E-33	34	90	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.553	36	90	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	5.0E-23	36	85	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	38	74	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence Send to blast
MATLPLEEVL AGCPKTQQQQ QQQQERKPRP QPEQNLKCPR CDSTNTKFCY YNNYSLSQPR 60 YFCKGCRRYW TKGGSLRNVP VGGGCRKNKR SSSSTSKRAQ DQALATNSKP PLPTLLPPPL 120 SYDPSDLSLA FARLHKPPTA CQLGLDDHDP FLLGNPNTNP GHIPAATPGF LDILRGGLLD 180 TATTTSGFHN LYYGFGGHGS VEQVEDSVAG EEAVLPFDGG LSGATTTTTS STPTASQGSC 240 RAADGGESKV FMGLQWQVGT EGNMAAMDPG RDYWNGGGSS WPGLINSSLM

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HM366546	1e-63	HM366546.1 Prunus persica clone PpDOF1 Dof-type zinc finger domain-containing protein mRNA, complete cds.
GenBank	HM366547	1e-63	HM366547.1 Prunus persica clone PpDOF2 Dof-type zinc finger domain-containing protein mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008792304.1	0.0	dof zinc finger protein DOF3.2
TrEMBL	A0A2H3Y2Q3	0.0	A0A2H3Y2Q3_PHODC; dof zinc finger protein DOF3.2
STRING	XP_008792304.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4704	32	63

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	3e-30	TARGET OF MONOPTEROS 6