 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PDK_30s1076031g001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
|
| Family |
NAC |
| Protein Properties |
Length: 465aa MW: 52854.6 Da PI: 4.712 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s1076031g001 | genome | PDK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 184.1 | 3.3e-57 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
lppGfrFhPtdeelv +yLk+k++g k+el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd
PDK_30s1076031g001 6 LPPGFRFHPTDEELVAYYLKRKINGLKIEL-EIIPEVDLYKCEPWDLPdKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKD 95
79****************************.99**************95434555777********************************* PP
NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++v+s +++++g+kktLvfykgrap+g++t+Wvmheyrl
PDK_30s1076031g001 96 RKVTS-QKRTMGMKKTLVFYKGRAPHGSRTNWVMHEYRL 133
*****.9999***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 465 aa
Download sequence Send
to blast |
MTPTGLPPGF RFHPTDEELV AYYLKRKING LKIELEIIPE VDLYKCEPWD LPDKSLLPSK 60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS QKRTMGMKKT LVFYKGRAPH 120
GSRTNWVMHE YRLDEKECET NSGLQDAYSL CRVFKKTMPA PKIIDQYDVS NEEHSRRMSS 180
GNTSTLDALT SGREDKESCG YLYPPETCSS DLIQGVPCDA NAPITEKWVQ LLADESFRSA 240
PMLFDNPLNS CYVQSEVDVA LECAKLQHRL SLPPLELEDF PQIDFLNSKT LEYGFIEENT 300
SEVDALQEIL SVASASQELI NNPNYPYAWT KVSPYFTNPI EEQKIDGSTQ LCQMESVEEQ 360
ASLRDISALE EDLMEEKKTV ESLRTITMPM NDTVKKKPTH IPSQSIDLPT GFTGIHQSAA 420
YEEDRQLDFY FSTPTFDVIA KGDTNHGYFV SSGSMAEALF IMLSP
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 6e-59 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 6e-59 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 6e-59 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 6e-59 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 5e-59 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 5e-59 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 5e-59 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 5e-59 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 5e-59 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 5e-59 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 5e-59 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 5e-59 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 6e-59 | 1 | 162 | 12 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 6e-59 | 1 | 162 | 12 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor directing sieve element enucleation and cytosol degradation. Not required for formation of lytic vacuoles. Regulates, with NAC086, the transcription of NEN1, NEN2, NEN3, NEN4, RTM1, RTM2, UBP16, PLDZETA, ABCB10 and At1g26450. {ECO:0000269|PubMed:25081480}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Regulated by the transcription factor APL (AC Q9SAK5). {ECO:0000269|PubMed:25081480}. |
