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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
PDK_30s1065091g004 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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| Family |
LBD |
| Protein Properties |
Length: 226aa MW: 25429.7 Da PI: 8.7381 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s1065091g004 | genome | PDK | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 111.6 | 5.4e-35 | 84 | 180 | 5 | 101 |
DUF260 5 CkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95
C++lr+kC +dCvlap+fp++qp++fa+vh++FGasnv+++l++lp ++++ a++++ eA +r+rdPvyG+vg+i+ lqq+++ ++ ela
PDK_30s1065091g004 84 CRYLRKKCGEDCVLAPHFPSTQPHRFACVHRIFGASNVSRMLQQLPSDKQPPAADAISSEAYWRVRDPVYGSVGIISMLQQEIHMVQRELA 174
******************************************************************************************* PP
DUF260 96 llkeel 101
++++++
PDK_30s1065091g004 175 ETQAQI 180
*99985 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 226 aa
Download sequence Send
to blast |
MQLSTNEIRN NCISGSIDHL IIAQNTARPH ESMGTALTSA NRNYTQRRTA YKSSRRLSTW 60
EFLSLVLLSG KDAPINPLFG KLRCRYLRKK CGEDCVLAPH FPSTQPHRFA CVHRIFGASN 120
VSRMLQQLPS DKQPPAADAI SSEAYWRVRD PVYGSVGIIS MLQQEIHMVQ RELAETQAQI 180
AVYQTQLQSQ LAQPSEALHF DAQLNDHQFG SDSTNFNGFS QSPHFP
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