PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1051061g002
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family WRKY
Protein Properties Length: 283aa    MW: 31037.8 Da    PI: 5.045
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1051061g002genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY361.4e-111051452259
                         EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY  22 rsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                         r+Y++C ++   gC++ k+v+r ++dp ++ +tY g+H ++
  PDK_30s1051061g002 105 RGYFKCGQKkdqGCQAIKHVQRMQDDPPMFLVTYIGQHSCT 145
                         99*****998889*************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007743.8E-892146IPR003657WRKY domain
SuperFamilySSF1182908.11E-11103145IPR003657WRKY domain
PfamPF031062.5E-11104144IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.7E-11104145IPR003657WRKY domain
PROSITE profilePS5081112.782105143IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MDRFPGHEAV TRELVRGREL ASQLRAVLRE LVAGGRCEPV DALVEEISGS FARALTVLTS  60
GEARVVRSDP ETFAPSSQNT QQEGGNGKML KISEARCWNA GIRRRGYFKC GQKKDQGCQA  120
IKHVQRMQDD PPMFLVTYIG QHSCTDVFQT SQWIPDDSPP SDKCMLSFES DRSSINHQGN  180
YWSSPEVVPK SPTLWEPSQA TSSKKSTMET SYDAPSIPAA VDLPEWSPFL MDRPGCSSAV  240
PGMPSPPVPQ ATDVDSFMGL LESFAGLCSD KDVGYEGNRS KDP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008782779.10.0probable WRKY transcription factor 70
TrEMBLA0A2H3XF380.0A0A2H3XF38_PHODC; probable WRKY transcription factor 70
STRINGXP_008782779.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP5079622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01900.17e-12WRKY DNA-binding protein 62