PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1049341g002
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family TALE
Protein Properties Length: 486aa    MW: 54185.7 Da    PI: 7.3843
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1049341g002genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.65e-092512881954
                         HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
            Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                         Fe   ++yps  ++  LA+++gL+ +qV++WF N R +
  PDK_30s1049341g002 251 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 288
                         554459******************************88 PP
2BELL115.42.9e-37114183372
                BELL   3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                          elqk+kakLls+leeVd+rYk+y+eq+++v+ssFeavag g+a +Y  lA+ka+S+hFrcLkd i++qi
  PDK_30s1049341g002 114 LELQKRKAKLLSMLEEVDRRYKKYCEQMRAVVSSFEAVAGEGAASVYSMLASKAMSKHFRCLKDGIVGQI 183
                         599*****************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.8E-5651181IPR006563POX domain
PfamPF075262.5E-4557179IPR006563POX domain
CDDcd000864.04E-11232293No hitNo description
SMARTSM003891.0E-8232296IPR001356Homeobox domain
SuperFamilySSF466892.69E-17233299IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.9E-27235298IPR009057Homeodomain-like
PfamPF059206.0E-18249288IPR008422Homeobox KN domain
PROSITE profilePS5007111.548251292IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    Send to blast
MAHHPQEKPG TQISPAFGYI DFSSTGNSNI QSFESNQELY SLRAGMEMLG RGFIPKLKSS  60
KFLIPAQELL NEFCSLGGAG NSSKQKSYKA NQWEEGGSSS NSSRNQSLYS SDVLELQKRK  120
AKLLSMLEEV DRRYKKYCEQ MRAVVSSFEA VAGEGAASVY SMLASKAMSK HFRCLKDGIV  180
GQIRAIKKAM GEKDPVAPGT IRGETPRLKL IDQCLRQQKA FQQAGTMESC PWRPQRGLPE  240
CSVSILRAWL FEHFLHPYPS DVDKHILARQ TGLSRSQVSN WFINARVRLW KPMVEEMYSE  300
EIKEQDKQTS QEENNGHNNC RPGELQSKRN PNPNSSSLQL HAEDQKPTPG ELLNCSDSLS  360
SIVNSSHHCT NGRDPTDGKS SFHDPRQHHP VPRAENFGVM DLDFTSYGEC SNQNFGDGVS  420
LTLGLQQHNE GAMSLSFSPA SQHSLFFSRA QMEDCQPGQF SILDGEAQNL PYRNLMGAQL  480
LHDLAG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A3e-16238295158Homeobox protein Meis1
4xrs_B3e-16238295158Homeobox protein Meis1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPlays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008783445.10.0homeobox protein BEL1 homolog
RefseqXP_008783446.10.0homeobox protein BEL1 homolog
RefseqXP_008783447.10.0homeobox protein BEL1 homolog
RefseqXP_026658656.10.0homeobox protein BEL1 homolog
SwissprotQ388971e-118BEL1_ARATH; Homeobox protein BEL1 homolog
TrEMBLA0A2H3XGJ80.0A0A2H3XGJ8_PHODC; homeobox protein BEL1 homolog
STRINGXP_008783445.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38143764
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.11e-116TALE family protein
Publications ? help Back to Top
  1. Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS
    CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules.
    Development, 2016. 143(3): p. 422-6
    [PMID:26700684]
  2. Lozano-Sotomayor P, et al.
    Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana.
    Plant J., 2016. 88(3): p. 437-451
    [PMID:27402171]