PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s1000401g007 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | NAC | ||||||||
Protein Properties | Length: 141aa MW: 16481.5 Da PI: 9.6369 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 67.1 | 5e-21 | 4 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv...ePwdLpkkvkaeekewyfFskrdkkyatgk..rknr.atksgyWka 85 lppG+rF+Ptd+e+v + v g++l+ +i + d+ ++ +P+d + + ++y++++ k+ +g+ r +r + +g+Wk+ PDK_30s1000401g007 4 LPPGVRFQPTDQEIVLYLCYYAVFGQPLDN-GFIMNGDLRYFqveQPQDVR-----SLGRLYYYTNCFYKQVRGRptRDRRtVDGKGRWKS 88 79*************666666788888888.77877777766334688886.....234678887777766654332888845569***** PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkge.ktdWvmheyrl 128 t +k++++ ++e g k+ + f + +a+ ge +t+Wvm ey+l PDK_30s1000401g007 89 TDGQKTIYQ-SSEIAGYKQNFRFRRLTASGGEvSTTWVMTEYTL 131 *********.999***********9888877659********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.75E-26 | 2 | 138 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 23.269 | 4 | 141 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.1E-14 | 5 | 131 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence Send to blast |
MEGLPPGVRF QPTDQEIVLY LCYYAVFGQP LDNGFIMNGD LRYFQVEQPQ DVRSLGRLYY 60 YTNCFYKQVR GRPTRDRRTV DGKGRWKSTD GQKTIYQSSE IAGYKQNFRF RRLTASGGEV 120 STTWVMTEYT LHSNKSNNNN M |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | XP_008780765.1 | 3e-86 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP21061 | 2 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 5e-17 | NAC domain containing protein 38 |