PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote237440670001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | ERF | ||||||||
Protein Properties | Length: 89aa MW: 10141.2 Da PI: 4.861 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 28 | 5.6e-09 | 1 | 24 | 33 | 56 |
AP2 33 lgkfgtaeeAakaaiaarkklege 56 lg+f+taeeAa+a+++a+ kl+g+ Ote237440670001|237440670001 1 LGTFDTAEEAARAYDKAAFKLRGH 24 7*********************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 5.6E-5 | 1 | 24 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 8.1E-14 | 1 | 33 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 12.8 | 1 | 31 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.29E-15 | 1 | 32 | No hit | No description |
SuperFamily | SSF54171 | 1.5E-10 | 1 | 32 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 5.7E-5 | 1 | 37 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 89 aa Download sequence Send to blast |
LGTFDTAEEA ARAYDKAAFK LRGHLAILNF PNEYYSQLAI PPYNPTFTTS SSSSSSRRDS 60 SWEKIELEYF DDSLLEELLE SPEAKKKKK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 3e-13 | 1 | 74 | 42 | 114 | Ethylene-responsive transcription factor ERF096 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011091225.1 | 6e-37 | ethylene-responsive transcription factor ERF098-like | ||||
Swissprot | Q9LTC5 | 8e-24 | ERF98_ARATH; Ethylene-responsive transcription factor ERF098 | ||||
TrEMBL | A0A4D9AWC5 | 4e-30 | A0A4D9AWC5_SALSN; Uncharacterized protein | ||||
STRING | XP_009621246.1 | 3e-27 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Publications ? help Back to Top | |||
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