PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100266590021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | G2-like | ||||||||
Protein Properties | Length: 288aa MW: 32632.8 Da PI: 10.1515 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 103.1 | 1.7e-32 | 55 | 108 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH +Fv+ave+LGG+ekAtPk +l+lm+vkgL+++hvkSHLQ+YR+ Ote100266590021|100266590021 55 PRLRWTPELHLCFVHAVERLGGEEKATPKLVLQLMNVKGLSIAHVKSHLQMYRS 108 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 5.0E-31 | 51 | 109 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 12.852 | 51 | 111 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 8.24E-16 | 52 | 109 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.1E-23 | 55 | 110 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 6.8E-10 | 56 | 107 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence Send to blast |
MQRAITNSEI DEEMENSKIE KESKRNSSSN STVEENNGKK GSSGSVRQYV RSKTPRLRWT 60 PELHLCFVHA VERLGGEEKA TPKLVLQLMN VKGLSIAHVK SHLQMYRSKK IDDPSEVISQ 120 QRLLLDAGDR HVYNLSQLPM LQSFNQPPIS SLRFRDAILS SQNNNVYQSR DSWKFLENDH 180 KNLMNQRFWQ THQTVTSLLT SKAHSLHTPL NLRPREGTPL QEEGSSILKR KFSPEVNLDL 240 SLSLRTTAQS NEKKMKTTQV DSSLSLSLSS PSKETIHGGI SNSLDLSL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 1e-17 | 56 | 110 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 1e-17 | 56 | 110 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 1e-17 | 56 | 110 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-17 | 56 | 110 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-17 | 56 | 110 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-17 | 56 | 110 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 1e-17 | 56 | 110 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 1e-17 | 56 | 110 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 1e-17 | 56 | 110 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 1e-17 | 56 | 110 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 1e-17 | 56 | 110 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 1e-17 | 56 | 110 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00301 | DAP | Transfer from AT2G40260 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011076824.2 | 1e-100 | uncharacterized protein LOC105160975 | ||||
TrEMBL | A0A2Z7A5C4 | 5e-95 | A0A2Z7A5C4_9LAMI; Uncharacterized protein | ||||
STRING | XP_010257080.1 | 6e-65 | (Nelumbo nucifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8573 | 21 | 29 |