PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100260500081

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

VOZ

Protein Properties

Length: 511aa MW: 56564.4 Da PI: 5.5105

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100260500081	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	142.3	3.6e-44	206	302	1	94
VOZ 1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgip 78 pppsaflg kcalwdc+rpa g w q +ycs +ha la eg pg pv+rp+gi+lkd+llfaal ak+qgk+vgip Ote100260500081\|100260500081 206 PPPSAFLGAKCALWDCPRPALGLGWSQepdEYCSVYHAGLAPGEGYPGRPPVVRPGGIGLKDNLLFAALGAKAQGKDVGIP 286 89******************999974446********************************************** PP VOZ 79 ecegaatakspwnaae 94 ecegaat+kspwna+ Ote100260500081\|100260500081 287 ECEGAATTKSPWNAPG 302 ************95 PP
2	VOZ	215.5	1.4e-66	325	450	92	217
VOZ 92 aaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyey 172 ++elfdl++legetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+e+gglkrsyymdpqp++sfewhlyey Ote100260500081\|100260500081 325 STELFDLTILEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEYGGLKRSYYMDPQPMESFEWHLYEY 405 58***************************************************************************** PP VOZ 173 eineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 ein++da+alyrle+k vd qk+lgrl+a Ote100260500081\|100260500081 406 EINKYDACALYRLEVKRVDXXXXXXXXXXXXXXXXXQKQLGRLSA 450 ****************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence Send to blast
MVKGVKSGAC KSASHQLFKD KAKNRVDDLQ GIFSDLQSAR KESRTIDVAV LEEQVHQMLR 60 EWKAELNDPS PASSVQQGGS LGFSSDISRL LQLCEEEDDA SSALAAPKLE PGAPKAADGF 120 TCHQGFNISS NPQEQSFSLA DQCKSTGMGM TNMGMNNMAL ARQLELQSIA LHQELGPQYF 180 VGFDSSSFVG ADGLPQMPGY QHNIYPPPSA FLGAKCALWD CPRPALGLGW SQEPDEYCSV 240 YHAGLAPGEG YPGRPPVVRP GGIGLKDNLL FAALGAKAQG KDVGIPECEG AATTKSPWNA 300 PGKLAHYLSQ LPDFSYVVDV LFLVSTELFD LTILEGETIR EWLFFDKPRR AFESGNRKQR 360 SLPDYNGRGW HESRKQVMNE YGGLKRSYYM DPQPMESFEW HLYEYEINKY DACALYRLEV 420 KRVDXXXXXX XXXXXXXXXX XQKQLGRLSA EFPNEKQHRV VKARGKANAK DGTGSIYPST 480 ATLPSSGEGL EYVRGTPYDY LVDNIDGYYL T

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence Send to blast

MVKGVKSGAC KSASHQLFKD KAKNRVDDLQ GIFSDLQSAR KESRTIDVAV LEEQVHQMLR  60
EWKAELNDPS PASSVQQGGS LGFSSDISRL LQLCEEEDDA SSALAAPKLE PGAPKAADGF  120
TCHQGFNISS NPQEQSFSLA DQCKSTGMGM TNMGMNNMAL ARQLELQSIA LHQELGPQYF  180
VGFDSSSFVG ADGLPQMPGY QHNIYPPPSA FLGAKCALWD CPRPALGLGW SQEPDEYCSV  240
YHAGLAPGEG YPGRPPVVRP GGIGLKDNLL FAALGAKAQG KDVGIPECEG AATTKSPWNA  300
PGKLAHYLSQ LPDFSYVVDV LFLVSTELFD LTILEGETIR EWLFFDKPRR AFESGNRKQR  360
SLPDYNGRGW HESRKQVMNE YGGLKRSYYM DPQPMESFEW HLYEYEINKY DACALYRLEV  420
KRVDXXXXXX XXXXXXXXXX XQKQLGRLSA EFPNEKQHRV VKARGKANAK DGTGSIYPST  480
ATLPSSGEGL EYVRGTPYDY LVDNIDGYYL T

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011086027.1	0.0	transcription factor VOZ1-like isoform X1
Refseq	XP_011086028.1	0.0	transcription factor VOZ1-like isoform X1
Refseq	XP_020551529.1	0.0	transcription factor VOZ1-like isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A4D8ZHY0	0.0	A0A4D8ZHY0_SALSN; Uncharacterized protein
STRING	Migut.M01093.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2818	24	54

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]