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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100260500081 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | VOZ | ||||||||
Protein Properties | Length: 511aa MW: 56564.4 Da PI: 5.5105 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 142.3 | 3.6e-44 | 206 | 302 | 1 | 94 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgip 78 pppsaflg kcalwdc+rpa g w q +ycs +ha la eg pg pv+rp+gi+lkd+llfaal ak+qgk+vgip Ote100260500081|100260500081 206 PPPSAFLGAKCALWDCPRPALGLGWSQepdEYCSVYHAGLAPGEGYPGRPPVVRPGGIGLKDNLLFAALGAKAQGKDVGIP 286 89********************999974446************************************************** PP VOZ 79 ecegaatakspwnaae 94 ecegaat+kspwna+ Ote100260500081|100260500081 287 ECEGAATTKSPWNAPG 302 **************95 PP | |||||||
2 | VOZ | 215.5 | 1.4e-66 | 325 | 450 | 92 | 217 |
VOZ 92 aaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyey 172 ++elfdl++legetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+e+gglkrsyymdpqp++sfewhlyey Ote100260500081|100260500081 325 STELFDLTILEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEYGGLKRSYYMDPQPMESFEWHLYEY 405 58******************************************************************************* PP VOZ 173 eineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 ein++da+alyrle+k vd qk+lgrl+a Ote100260500081|100260500081 406 EINKYDACALYRLEVKRVDXXXXXXXXXXXXXXXXXQKQLGRLSA 450 ******************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 511 aa Download sequence Send to blast |
MVKGVKSGAC KSASHQLFKD KAKNRVDDLQ GIFSDLQSAR KESRTIDVAV LEEQVHQMLR 60 EWKAELNDPS PASSVQQGGS LGFSSDISRL LQLCEEEDDA SSALAAPKLE PGAPKAADGF 120 TCHQGFNISS NPQEQSFSLA DQCKSTGMGM TNMGMNNMAL ARQLELQSIA LHQELGPQYF 180 VGFDSSSFVG ADGLPQMPGY QHNIYPPPSA FLGAKCALWD CPRPALGLGW SQEPDEYCSV 240 YHAGLAPGEG YPGRPPVVRP GGIGLKDNLL FAALGAKAQG KDVGIPECEG AATTKSPWNA 300 PGKLAHYLSQ LPDFSYVVDV LFLVSTELFD LTILEGETIR EWLFFDKPRR AFESGNRKQR 360 SLPDYNGRGW HESRKQVMNE YGGLKRSYYM DPQPMESFEW HLYEYEINKY DACALYRLEV 420 KRVDXXXXXX XXXXXXXXXX XQKQLGRLSA EFPNEKQHRV VKARGKANAK DGTGSIYPST 480 ATLPSSGEGL EYVRGTPYDY LVDNIDGYYL T |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011086027.1 | 0.0 | transcription factor VOZ1-like isoform X1 | ||||
Refseq | XP_011086028.1 | 0.0 | transcription factor VOZ1-like isoform X1 | ||||
Refseq | XP_020551529.1 | 0.0 | transcription factor VOZ1-like isoform X1 | ||||
Swissprot | Q9SGQ0 | 0.0 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A4D8ZHY0 | 0.0 | A0A4D8ZHY0_SALSN; Uncharacterized protein | ||||
STRING | Migut.M01093.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2818 | 24 | 54 |
Publications ? help Back to Top | |||
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