PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100256130001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 147aa MW: 16646.9 Da PI: 6.0186 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.9 | 1e-14 | 32 | 77 | 3 | 53 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 r+h+e+E+rRRdriN +++Lr+l+Pk+ +K++Ka+ L ++ve++k+ Ote100256130001|100256130001 32 RSHSEAEKRRRDRINAQLATLRKLIPKS-----EKMDKAALLGHVVEHVKE 77 78*************************8.....8**************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 9.16E-13 | 22 | 79 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.364 | 29 | 78 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.59E-10 | 32 | 77 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.7E-14 | 32 | 77 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.6E-12 | 32 | 77 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 8.0E-12 | 35 | 86 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence Send to blast |
MENFYWPHLQ FTDYDPYLPP PPEEDRAATA SRSHSEAEKR RRDRINAQLA TLRKLIPKSE 60 KMDKAALLGH VVEHVKEQSL RAKEVGKTST IPTEIDEVII DHLNAQESTT SSSQIMYMKA 120 SICCDDRPEF FAEMKSALKG IGATIAE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022887145.1 | 6e-57 | transcription factor bHLH51-like | ||||
TrEMBL | A0A2G9GF97 | 2e-60 | A0A2G9GF97_9LAMI; Uncharacterized protein | ||||
STRING | Migut.F00663.1.p | 1e-51 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5820 | 22 | 35 |