PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100244210041 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | GRAS | ||||||||
Protein Properties | Length: 202aa MW: 22466 Da PI: 4.7906 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 82.3 | 8.5e-26 | 2 | 146 | 129 | 280 |
GRAS 129 lqaLasRpeg.ppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvl 208 ++aLa R++ +l+iT+v s ++ ++ eetg+ L++f e++++pf f++l ++ le +L+++ +E+++V + + Ote100244210041|100244210041 2 IDALARRKGClVKQLKITAVYS---HKLNAEEETGKLLSSFTESMNLPFVFKIL-YSEKGLLEKGDLQLEGDETVVVYMEF 78 899**99966256********9...5688889*********************6.77789999****************** PP GRAS 209 qlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280 l l+ + s +++L+ +k+ls v+vvv+ ead ++F +rf eal sa+fdsl++ l++es+ Ote100244210041|100244210041 79 FLVASLACPKS----GEAFLRGLKDLSTSVIVVVDVEADIKVATFTARFKEALVLSSAMFDSLQVCLGQESQ 146 99999955544....556***********************************************9999886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50985 | 13.628 | 1 | 202 | IPR005202 | Transcription factor GRAS |
Pfam | PF03514 | 3.0E-23 | 2 | 146 | IPR005202 | Transcription factor GRAS |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence Send to blast |
MIDALARRKG CLVKQLKITA VYSHKLNAEE ETGKLLSSFT ESMNLPFVFK ILYSEKGLLE 60 KGDLQLEGDE TVVVYMEFFL VASLACPKSG EAFLRGLKDL STSVIVVVDV EADIKVATFT 120 ARFKEALVLS SAMFDSLQVC LGQESQIDFW REYFSGLGIV EAEQSQVSLY QASLMVRECG 180 RWSGCSLEMN GKSLVIGWNG FR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A4D9A6M6 | 8e-60 | A0A4D9A6M6_SALSN; Uncharacterized protein | ||||
TrEMBL | A0A4D9BHV9 | 2e-56 | A0A4D9BHV9_SALSN; Uncharacterized protein |