PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100235590071
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family C2H2
Protein Properties Length: 496aa    MW: 55339.2 Da    PI: 8.3005
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100235590071genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.00024435457123
                                   EEETTTTEEESSHHHHHHHHHHT CS
                       zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                                   ++Cp C+++F++   L  H r+H
  Ote100235590071|100235590071 435 HVCPFCDRVFKNGQALGGHKRSH 457
                                   79******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.4111138IPR007087Zinc finger, C2H2
PfamPF139127.4E-71133IPR007087Zinc finger, C2H2
SuperFamilySSF576675.75E-61133No hitNo description
SMARTSM003550.91133IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002801333IPR007087Zinc finger, C2H2
SuperFamilySSF576675.75E-696123No hitNo description
PROSITE profilePS5015710.201101128IPR007087Zinc finger, C2H2
SMARTSM003550.15101123IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280103123IPR007087Zinc finger, C2H2
PfamPF139121.2E-5103125IPR007087Zinc finger, C2H2
PfamPF139123.1E-7359379IPR007087Zinc finger, C2H2
SuperFamilySSF576673.28E-5359382No hitNo description
SMARTSM00355260360389IPR015880Zinc finger, C2H2-like
SuperFamilySSF576673.28E-5430457No hitNo description
PfamPF139122.1E-8434457IPR007087Zinc finger, C2H2
SMARTSM003550.015435457IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.141435457IPR007087Zinc finger, C2H2
PROSITE patternPS000280437457IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 496 aa     Download sequence    Send to blast
MAEEGSNESR FVCKLCYKKF PCGKSLGGHM RSHVVANSAE FQEKVVLSMK KNLFANESKF  60
AESGNGHNGY GLRENPKKTW RAVDSRLXXX XXXXXXXXXX XVCKQCGKGF QSMKALCGHM  120
ACHSEKDKGT AAKDYHDHDH SWTNDNQKMV LDSQSDTETE ENRFRTRSSK ARKCKKILEE  180
SPFVLASNGG SSVSEIDGQE QEELAKCLMM LSRDSGSKGG VNSVVESSDN NSVVVETKSS  240
SIEMRKGGKG RVGEKMLHVE KNDTSKLLDG SLDGETAKTE DSDSGYFLDE CGKGESDVSV  300
GWFRRNCGFS ESLKAIKNAA FDDEGVMVSK SRKRKHGYEN QESRNESARM VKDTCKKSRY  360
ECFNCKKVFK SYQALGGHRP CNKRISESHD ESSENSPDDA AYYTKFVESS SKKKKQSAKY  420
QLAEKKSKDV KNKAHVCPFC DRVFKNGQAL GGHKRSHFLP GHDESINRSE NPKLNDLLDL  480
NLPAPEADED EGAVSW
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075585.10.0uncharacterized protein LOC105160026
TrEMBLA0A2G9HWQ11e-171A0A2G9HWQ1_9LAMI; Uncharacterized protein
STRINGMigut.L01205.1.p1e-157(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13432255