PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ote100235340031 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
||||||||
Family | NF-YA | ||||||||
Protein Properties | Length: 183aa MW: 19921.6 Da PI: 9.2365 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 42 | 3e-13 | 141 | 173 | 3 | 36 |
CBFB_NFYA 3 plYVNaKQyqrIlkRRqkRakleeekkldeksrk 36 p++VNaKQy++I++RR+kRak++ +++ k rk Ote100235340031|100235340031 141 PIFVNAKQYNGIMRRRKKRAKADLHNNF-LKIRK 173 9**********************99886.55555 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51152 | 14.966 | 138 | 183 | IPR001289 | Nuclear transcription factor Y subunit A |
Pfam | PF02045 | 1.6E-10 | 141 | 173 | IPR001289 | Nuclear transcription factor Y subunit A |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 183 aa Download sequence Send to blast |
MTLHTVFCKE NEGGAQNPIH GGAAQWSGLG CQAVYGGEGF VQSAAAKDVH GKPNSNTTHF 60 NLFSGDCKSG ENGKSPLLPA SCVPAANVDY RGHLELGFGQ SLICGKYPYP DQCYGVYSSY 120 GSPQFPGRMM LPLRLSSDGG PIFVNAKQYN GIMRRRKKRA KADLHNNFLK IRKVTENHLH 180 CMQ |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011094246.1 | 2e-63 | nuclear transcription factor Y subunit A-10 | ||||
Refseq | XP_020553756.1 | 2e-63 | nuclear transcription factor Y subunit A-10 | ||||
Refseq | XP_020553757.1 | 2e-63 | nuclear transcription factor Y subunit A-10 | ||||
TrEMBL | A0A2Z4K5F5 | 6e-61 | A0A2Z4K5F5_TECGR; NF-Y2 protein | ||||
STRING | Migut.J00688.1.p | 1e-56 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3706 | 23 | 47 |