PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100226380181

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

G2-like

Protein Properties

Length: 378aa MW: 42487.4 Da PI: 10.1651

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100226380181	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98	6.6e-31	89	142	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+a+++LGG+ +AtPk++l+lm+v gL+++hvkSHLQ+YR+ Ote100226380181\|100226380181 89 PRLRWTPDLHLSFVHAIQRLGGQGRATPKAVLQLMNVRGLSISHVKSHLQMYRS 142 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.5E-28	85	143	IPR009057	Homeodomain-like
PROSITE profile	PS51294	9.37	85	145	IPR017930	Myb domain
SuperFamily	SSF46689	1.59E-14	87	143	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	8.5E-23	89	144	IPR006447	Myb domain, plants
Pfam	PF00249	2.3E-8	90	141	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence Send to blast
MSNDQIIRQS SLGKRMDDII SAEADNTLSS SSENSSSIDL NEDAVSGVVG DLMNETSSIS 60 IQRKEQGDEG KEKSKNNSSV RQYVRSKMPR LRWTPDLHLS FVHAIQRLGG QGRATPKAVL 120 QLMNVRGLSI SHVKSHLQMY RSKKLDESGR VIGQSNSLYI QGRGYVYDKC SSPFHELRVE 180 NGGIVLARKS NPSSPFPQTL KSHHPYQINT LSSRYHPWSS LYRHEPNILS NRTHALHESY 240 SNGPIRPAQF LEGRRWPPRE FIQNQKEISK SNNVWSSNEN LRQQSRWDSG FINQQKSSFV 300 ASHNSKPFIN LDNPLRLQMK EKGNFNHTEW FPSDLKLSLS IGLSNNNVQK SCCNDDGGGG 360 INTKLSLALT PHSSSTAT

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence Send to blast

MSNDQIIRQS SLGKRMDDII SAEADNTLSS SSENSSSIDL NEDAVSGVVG DLMNETSSIS  60
IQRKEQGDEG KEKSKNNSSV RQYVRSKMPR LRWTPDLHLS FVHAIQRLGG QGRATPKAVL  120
QLMNVRGLSI SHVKSHLQMY RSKKLDESGR VIGQSNSLYI QGRGYVYDKC SSPFHELRVE  180
NGGIVLARKS NPSSPFPQTL KSHHPYQINT LSSRYHPWSS LYRHEPNILS NRTHALHESY  240
SNGPIRPAQF LEGRRWPPRE FIQNQKEISK SNNVWSSNEN LRQQSRWDSG FINQQKSSFV  300
ASHNSKPFIN LDNPLRLQMK EKGNFNHTEW FPSDLKLSLS IGLSNNNVQK SCCNDDGGGG  360
INTKLSLALT PHSSSTAT

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	2e-17	90	144	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-17	90	144	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-17	90	144	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-17	90	144	3	57	Protein PHOSPHATE STARVATION RESPONSE 1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011101395.1	1e-115	myb-related protein 2
Refseq	XP_020546992.1	1e-115	myb-related protein 2
TrEMBL	A0A4D9B0P7	1e-125	A0A4D9B0P7_SALSN; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5516	23	34