PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100220030101
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WRKY
Protein Properties Length: 619aa    MW: 68230 Da    PI: 8.8179
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100220030101genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY73.92.1e-23177233259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                   +DgynWrKYGqK+vk+ e +rsYYrCt+++C +kk +e+++  ++ +e++Y+++Hnh+
  Ote100220030101|100220030101 177 SDGYNWRKYGQKQVKSPEGSRSYYRCTFSDCYAKK-IECCDISNRPIETVYRSHHNHD 233
                                   7********************************98.*********************7 PP
2WRKY35.12.7e-11350370323
                                   -SS-EEEEEEE--TT-SS-EE CS
                          WRKY   3 DgynWrKYGqKevkgsefprs 23 
                                   Dgy+WrKYGqK+vkg+++pr+
  Ote100220030101|100220030101 350 DGYRWRKYGQKMVKGNPHPRN 370
                                   9******************96 PP
3WRKY46.48.2e-155075462059
                                   S-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY  20 fprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                   +  +YYrCtsagCpv+k++er+ ++ ++++itY+g H+h+
  Ote100220030101|100220030101 507 HFLNYYRCTSAGCPVRKHIERAVDNSSAIVITYKGIHDHD 546
                                   5578***********************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182902.48E-19172235IPR003657WRKY domain
Gene3DG3DSA:2.20.25.808.1E-20172235IPR003657WRKY domain
SMARTSM007748.0E-22176234IPR003657WRKY domain
PROSITE profilePS5081118.452177235IPR003657WRKY domain
PfamPF031064.9E-16178233IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.2E-24333368IPR003657WRKY domain
PROSITE profilePS5081118.2343548IPR003657WRKY domain
SuperFamilySSF1182904.18E-9344377IPR003657WRKY domain
SMARTSM007742.1E-19348547IPR003657WRKY domain
PfamPF031062.6E-7350370IPR003657WRKY domain
SuperFamilySSF1182904.71E-12505548IPR003657WRKY domain
PfamPF031061.4E-9506545IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.2E-24509548IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 619 aa     Download sequence    Send to blast
MEGAINRSSH DVRETVTENS ELKEEREKEN PGKEVEKQRR VSNDRTSDCA LGNSSTGESK  60
SSQFQTLDSV ELPGRDFRAN FDDSSDHLSE VPVEYTLQPL QSEGKMKNQV KAVQKEVLKD  120
VGCTNSPSVT KITSSIAGSK LPELKLPKEN GSNVCVPEQD KQNPKRLSIV PTPRTPSDGY  180
NWRKYGQKQV KSPEGSRSYY RCTFSDCYAK KIECCDISNR PIETVYRSHH NHDPPQKLNV  240
TRDSKPALSP ISVSGSNNTS HPVRQLNDLV PSTPSKEHVV GLDKIPETKQ ESSGSDENTG  300
TIAKEHYSDV PDSKKRQKRN STSEVETLPK PGKKPKYVVH AAGDVGISGD GYRWRKYGQK  360
MVKGNPHPRN AVMDCFARGI QKAGTIHPEK SMENMKSRGP SKTTAICHPI LGSLDRGSVL  420
IPNCRGLILW VSFFPLNACT SCPLRGFSGM TTVLCCLGLK KEMGSAPKQL PSLIFSHFVL  480
DTFLPFSYSV IPCSVILACG PMHHGQHFLN YYRCTSAGCP VRKHIERAVD NSSAIVITYK  540
GIHDHDTPVP RKRHGQKSGI CGPNSPCSLN DKSQSHKTQQ TEWSVDKEGE LTGEALVGGE  600
KASESARTLL SVGFEIKPC
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083976.11e-119probable WRKY transcription factor 32 isoform X1
RefseqXP_020551145.11e-120probable WRKY transcription factor 32 isoform X2
SwissprotP595832e-52WRK32_ARATH; Probable WRKY transcription factor 32
TrEMBLA0A0D5Y9971e-178A0A0D5Y997_SALMI; WRKY protein
STRINGMigut.K00328.1.p1e-115(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA91892127