PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100201140021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | C2H2 | ||||||||
Protein Properties | Length: 126aa MW: 14350 Da PI: 7.2129 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.3 | 0.00012 | 25 | 47 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C C++ F++ L H++ H Ote100201140021|100201140021 25 YECVFCKRGFNTAQALGGHMNIH 47 99*******************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 3.13E-6 | 23 | 51 | No hit | No description |
PROSITE profile | PS50157 | 10.554 | 25 | 52 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 1.4E-5 | 25 | 49 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 27 | 47 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence Send to blast |
MESMNYHEES SEGVVDEDVG VGRSYECVFC KRGFNTAQAL GGHMNIHRKH RSASARNKPK 60 LEDAPRILPS SPHLLSNSTL YESNYHHPYT SPSNPGDWRM RLALDKPKLP INQDKELNLE 120 LRLGYD |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011080295.1 | 7e-22 | transcriptional regulator SUPERMAN-like | ||||
Refseq | XP_022872994.1 | 5e-22 | transcriptional regulator SUPERMAN-like | ||||
TrEMBL | A0A4D8ZWN4 | 4e-35 | A0A4D8ZWN4_SALSN; Uncharacterized protein | ||||
STRING | Migut.D00404.1.p | 8e-19 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2136 | 21 | 52 |