PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100200310011
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family MYB_related
Protein Properties Length: 383aa    MW: 41615.3 Da    PI: 8.918
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100200310011genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.74.8e-07320356336
                                   SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS- CS
               Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRt 36 
                                   rW+  E++ l  +v+++G+g+Wk I        +gRt
  Ote100200310011|100200310011 320 RWSLLEEDTLRAGVEKYGKGNWKVILTANRdifEGRT 356
                                   9************************876655555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.3E-8312357IPR009057Homeodomain-like
SuperFamilySSF466896.86E-8315357IPR009057Homeodomain-like
CDDcd116601.45E-8319356No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MGPPFLEVVA EKLKNDEVLQ RIMGFNVVDV GAEEGVAKSC DDDAAAGGSK PSKVVEALKI  60
CVREEREKMG PPFLEVVAEK MKNDVVLQRI MRFNVVDVGA AEGVAKSXXX XXXXXXXXXS  120
KPSKEKNKPR IKLVIGLRKP RGMPSSNSRG AKIVDSDETA IGPSCGNSSP LSEEVKKARE  180
ALKLSSMELR AAVKDPLPDA LRIAEAICNG SKQDKQQDPV GGDDGRPETL FVDAAGVVQF  240
VDAAGVVQSN GGDTSSKPKP SLMERNSTAR TYEWDDSIDG SQEDITCRST IRVPSPKRIN  300
TSPLKIYEMN NVKKRRKGRR WSLLEEDTLR AGVEKYGKGN WKVILTANRD IFEGRTETYG  360
GGSRETADEA AARMAAAGLK KDA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090069.18e-86telomere repeat-binding protein 2-like
TrEMBLA0A2G9GRI08e-94A0A2G9GRI0_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37742439