PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100185870031 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | TCP | ||||||||
Protein Properties | Length: 62aa MW: 7061.19 Da PI: 4.6121 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 42.5 | 2.5e-13 | 1 | 42 | 38 | 74 |
TCP 38 eLGfdkdsktieWLlqqakpaikeltgtssssa.....sece 74 +LG+dk sktieWL++++k+ ikel++ +++ sece Ote100185870031|100185870031 1 MLGYDKESKTIEWLFNKSKKTIKELVKEMCDAKsesliSECE 42 8***************************44444113344442 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03634 | 1.1E-10 | 1 | 42 | IPR005333 | Transcription factor, TCP |
PROSITE profile | PS51369 | 16.595 | 1 | 25 | IPR017887 | Transcription factor TCP subgroup |
Sequence ? help Back to Top |
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Protein Sequence Length: 62 aa Download sequence Send to blast |
MLGYDKESKT IEWLFNKSKK TIKELVKEMC DAKSESLISE CEAMMGIEES SNIEKKGLVL 60 SE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020552305.1 | 1e-15 | transcription factor TCP12-like | ||||
TrEMBL | A0A2Z7A9P1 | 2e-15 | A0A2Z7A9P1_9LAMI; Uncharacterized protein | ||||
TrEMBL | Q6Y9X5 | 8e-16 | Q6Y9X5_SCRCA; TCP protein (Fragment) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2436 | 23 | 59 |