PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ote100185160171 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 983aa MW: 109399 Da PI: 5.7131 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 92.5 | 3.1e-29 | 596 | 647 | 1 | 52 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRqyGI+RWP+Rki+++ Ote100185160171|100185160171 596 AEKHVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQYGISRWPSRKINKV 647 5899**********************************************97 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 17.063 | 586 | 667 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 1.6E-25 | 600 | 647 | IPR003035 | RWP-RK domain |
SuperFamily | SSF54277 | 1.14E-20 | 875 | 967 | No hit | No description |
Gene3D | G3DSA:3.10.20.240 | 5.3E-22 | 880 | 962 | No hit | No description |
PROSITE profile | PS51745 | 18.798 | 883 | 965 | IPR000270 | PB1 domain |
SMART | SM00666 | 1.9E-21 | 883 | 965 | IPR000270 | PB1 domain |
Pfam | PF00564 | 1.0E-16 | 885 | 964 | IPR000270 | PB1 domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 983 aa Download sequence Send to blast |
MEHSIFNTER GHGFPFLQRG GMEGMVGSTD ISVHGSSLEN STIDVADVMN FDMHSGWCNN 60 SNNSVEQMFH SYANFSPLEV FSFTQELNSG ICILDNDDNR CALMSEDKVM LHNMDYQLPF 120 SISSDDDGFS LAKMRDESSE HNVIDDVGNN VISRPPNPSL AEKMLRALNL FKEWSERGIL 180 AQVWVPMKNG DQYILSTSEQ PYLLDQTLTG YREVSRSFTF AAELKPCSFS GLPGRVYSSR 240 VPEWTSNVIY YNKAEYLRVQ YAVDHEVRGS VAIPVFEGDS SEGSCCAVLE LVTTKEKSNF 300 DLEIKNVCRA LQAVDLRSFA PPRLYPQSLS NNQRAALAEI TDVLRAVCYA HRLPLALTWI 360 PCSYIVGSGG RNMKIHARGN SRSTNEKIIL CIEDSACYVN DKDMKGFVHA CREHYLEEGQ 420 GIVGKALQSN HPFFYPDIKD YHISEYPLVH HARKFGLSAA VAIRLRSTYT GDNDYILEFF 480 LPVNMKGSTE QQLLLNNLSG TMQRICKSLR TVSDVELHEM DDPMVKSQDL ESRNIPPISV 540 PRRASEQSLV SGSLNTTDPT TQNIIECTTA RIEVGDTNER NAIGLRKQME KKRSTAEKHV 600 SLSVLQQYFS GSLKDAAKSI GVCPTTLKRI CRQYGISRWP SRKINKVNRS LRKIQSVLDS 660 VQGVEGGLKF DPTIGGLVPT HPIIHECDSK RRGVNPDNND SRDFVNQNAN SAPTSCMDNQ 720 TSIVKVEEGC LLDGTQMAGK CEPCPPHLLS SEHSRFAALD VAVSRPTSMN TVPWTTSPNV 780 APSSFLPKET FNRWVSINTS YISQNSSMLG VGDEMDTKSG DDIVMDRDDR VVEHNQPTSS 840 GMTDSSDRSG SGSMMNGSSS SSRSSGKKQN HKNDTSYADS GSKIVVKATY KEDTVRFKFD 900 TAFGCIQLYE EIAQRFKLQV GQFQLRYLDD EEEWVMLVSD SDLQECLEIL DFTGTRSMKF 960 LVREVASIVG SSGGSNCFLG EGS |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011073897.1 | 0.0 | protein NLP9 | ||||
TrEMBL | A0A4D9C4G6 | 0.0 | A0A4D9C4G6_SALSN; Uncharacterized protein | ||||
STRING | Migut.N03106.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3981 | 24 | 45 |