PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100163180051
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family Nin-like
Protein Properties Length: 507aa    MW: 54809.7 Da    PI: 4.5848
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100163180051genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK51.52e-164081748
                        RWP-RK  7 ledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48
                                  +e+++k Fslp+ dAA +Lgvc++vLK+ C  +G+ RWP+R 
  Ote100163180051|100163180051 40 FEEVAKLFSLPLSDAADSLGVCPSVLKKVCYDNGLVRWPYRN 81
                                  799**************************************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151913.7191105IPR003035RWP-RK domain
PfamPF020421.5E-154081IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    Send to blast
MGTPXXXXXX XXXXXXXXXX XXXXXXXXXX AAPGLKSPPF EEVAKLFSLP LSDAADSLGV  60
CPSVLKKVCY DNGLVRWPYR NFLAGKSIEE IKKEAAGEKE KQLAELKVVR ERNVTSASPA  120
VSTSLAPQLQ SMTTSNVQEN PTSRTLTQQP NRDNQIGSFQ TTHISVMNKG TASSFDEFKY  180
GFPLNGLSTT SYKWWGNKSD RKNEADSAQS CNRDAEKKQQ PADSVDSGTN VSAMETTEGE  240
KKEADSVDSR SKVSAMESTE GEKKGAHSMN SGTNVSAMET TEGEKREADS VDNGTNALAV  300
EMTEGEKKEA DSVDSGTNAP AMETTEGEKK GAHSVDSGTN VSAMETTDGE KKEADSVDNG  360
TNVLAMETTE SEKKEVDSVD TGTNVLAMET TEGEKKEADS VDSGTNVSAM ETTEGEKKEA  420
DSVKSITNVS AMETTEGKKN ETDANPQQQT SVSALRKRAA EEGREALKRS VYRRYNVKTI  480
DPSKKSLLLQ IFKSSLPSEW GGVSPEN
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA107441921