PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100152920151 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | G2-like | ||||||||
Protein Properties | Length: 396aa MW: 45092 Da PI: 9.7547 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 99.6 | 2.1e-31 | 86 | 139 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+a+e+LGG+e+AtPk++l+lm+v gL+++hvkSHLQ+YR+ Ote100152920151|100152920151 86 PRLRWTPDLHLSFVHAIERLGGQERATPKAVLQLMNVRGLSISHVKSHLQMYRS 139 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.1E-29 | 82 | 140 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 10.409 | 82 | 142 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.77E-14 | 84 | 140 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.7E-23 | 86 | 141 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 2.5E-8 | 87 | 138 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 396 aa Download sequence Send to blast |
MEDIVSGEEI INGGQADNTV TSSSDRSSID LNEDAGSNEV GDPMNEVSSI SIQRRDEKSG 60 ESSKQSDEEK EKNKNAVRQY VRSKMPRLRW TPDLHLSFVH AIERLGGQER ATPKAVLQLM 120 NVRGLSISHV KSHLQMYRSK KLDESGRVIG GSNRVYIQGR GYVYDKCSSP FHELRIENGG 180 IVFARNSNLQ QDCSIPFPQT LKYHQPYFKN LSSRYHPWFS SYRHEPKVRL DSQLMSDAGK 240 DRFSGGPSRP AQFLEGRRWP PIHSQFKEKD VSKSNSIWSS TLSQNNFKPL INLEKPSRLQ 300 MNEERKFNRK DWFPVNLKLN LSLGLNDIND QKACSNDGDR SGINTKLSLA LAPHSSSTAT 360 XXXXXXXXXX XXXXPLSLFF GRLIYSHTFL NRSEFD |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 1e-18 | 87 | 141 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-18 | 87 | 141 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-18 | 87 | 141 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-18 | 87 | 141 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011101395.1 | 1e-120 | myb-related protein 2 | ||||
Refseq | XP_020546992.1 | 1e-120 | myb-related protein 2 | ||||
TrEMBL | A0A4D9B0P7 | 1e-121 | A0A4D9B0P7_SALSN; Uncharacterized protein | ||||
STRING | Migut.M01030.1.p | 2e-64 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5516 | 23 | 34 |