PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100150770061 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 216aa MW: 24265 Da PI: 4.7712 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.6 | 1.2e-19 | 68 | 121 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq+e Le+ F ++++ +++++LAk+lgL+ rqV +WFqNrRa++k Ote100150770061|100150770061 68 KKRRLTAEQVEFLEKSFDVENKLEPHRKTQLAKQLGLQPRQVAIWFQNRRARYK 121 56689************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 128.5 | 2.9e-41 | 67 | 159 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLe 81 ekkrrl++eqv++LE+sF+ e+kLep+rK++la++Lglqprqva+WFqnrRAR+ktk lEk+y++Lk++yd+lk++ e+L Ote100150770061|100150770061 67 EKKRRLTAEQVEFLEKSFDVENKLEPHRKTQLAKQLGLQPRQVAIWFQNRRARYKTKLLEKQYDSLKSCYDKLKADYEALF 147 69******************************************************************************* PP HD-ZIP_I/II 82 keveeLreelke 93 +++++L++el++ Ote100150770061|100150770061 148 SDNQKLKNELAN 159 *******99975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50071 | 17.686 | 63 | 123 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 1.03E-18 | 64 | 123 | IPR009057 | Homeodomain-like |
SMART | SM00389 | 8.1E-18 | 66 | 127 | IPR001356 | Homeobox domain |
Pfam | PF00046 | 6.9E-17 | 68 | 121 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.23E-17 | 68 | 123 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 3.7E-20 | 69 | 131 | IPR009057 | Homeodomain-like |
PRINTS | PR00031 | 2.4E-6 | 94 | 103 | IPR000047 | Helix-turn-helix motif |
PROSITE pattern | PS00027 | 0 | 98 | 121 | IPR017970 | Homeobox, conserved site |
PRINTS | PR00031 | 2.4E-6 | 103 | 119 | IPR000047 | Helix-turn-helix motif |
Pfam | PF02183 | 2.0E-11 | 124 | 160 | IPR003106 | Leucine zipper, homeobox-associated |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence Send to blast |
MKGTGCGVLD DSHVMMKDDA ITSTSDLVDS LWMPTSFHGT APASASVVGF DQAGGENKRL 60 GDDEMAEKKR RLTAEQVEFL EKSFDVENKL EPHRKTQLAK QLGLQPRQVA IWFQNRRARY 120 KTKLLEKQYD SLKSCYDKLK ADYEALFSDN QKLKNELANL LKDGCDASSS GRSDVLDSDS 180 SGVLEIDQSQ DEDDLHPNSC NLGFPAQNQG TWFWQY |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011071034.1 | 3e-68 | homeobox-leucine zipper protein HAT5-like | ||||
TrEMBL | A0A4D9BNR6 | 1e-64 | A0A4D9BNR6_SALSN; Homeobox-leucine zipper protein | ||||
STRING | Migut.L01347.1.p | 2e-55 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA825 | 24 | 95 |