PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100150630021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | WRKY | ||||||||
Protein Properties | Length: 394aa MW: 42816.8 Da PI: 9.4486 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 57.8 | 2.1e-18 | 316 | 372 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+Wr + r+YY+C++ gCp++k+ver+++dp+++++tYegeH+h+ Ote100150630021|100150630021 316 ADEYSWRNFANQFCD--SIFRGYYKCSTVrGCPARKHVERANDDPSMLIVTYEGEHRHT 372 699******987764..567******9888****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF10533 | 2.2E-14 | 261 | 313 | IPR018872 | Zn-cluster domain |
Gene3D | G3DSA:2.20.25.80 | 1.3E-20 | 304 | 372 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 19.313 | 310 | 374 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.92E-16 | 313 | 372 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.1E-14 | 315 | 373 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.9E-16 | 317 | 371 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:1990841 | Molecular Function | promoter-specific chromatin binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 394 aa Download sequence Send to blast |
MPRSPSPLLY LPIPLSLHLI HISLIFLLQS EIVTDEIVVK IISPRVSRKQ LEKMAVDLLG 60 YTNFNEQMAI QDAATAGLKS MEHLIRAVSH QQQQQNQQLD CRDITDFTVS KFRKVITILN 120 RTGHARFRRG PVQPHSSPLP PVHLQDSTPA STQPGYPVQP LNLFSLSPAP VVPQSPATVQ 180 PLTLDFTKPG TCAGKDCGDA TNKDGLSPST ALSNSGNSSS TFVSSITGEG SVSNGKGGSP 240 SIFLTPAAPA VSSGKPPLSG KRCREHDHSD NISGGKTSGS SRCHCKKRCV NFIWKSRVKR 300 VIRVPAISSK VADIPADEYS WRNFANQFCD SIFRGYYKCS TVRGCPARKH VERANDDPSM 360 LIVTYEGEHR HTQGAMQEIP AAGAPAQLVV FESS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Regulates rhizobacterium B.cereus AR156-induced systemic resistance (ISR) to P.syringae pv. tomato DC3000, probably by activating the jasmonic acid (JA)- signaling pathway (PubMed:26433201). {ECO:0000250, ECO:0000269|PubMed:26433201}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Strongly during leaf senescence (PubMed:11722756). Repressed by rhizobacterium B.cereus AR156 in leaves, and to a lower extent, by P.fluorescens WCS417r (PubMed:26433201). {ECO:0000269|PubMed:11722756, ECO:0000269|PubMed:26433201}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011082056.1 | 1e-157 | probable WRKY transcription factor 17 | ||||
Swissprot | Q9SV15 | 3e-97 | WRK11_ARATH; Probable WRKY transcription factor 11 | ||||
TrEMBL | A0A2G9GIC6 | 1e-158 | A0A2G9GIC6_9LAMI; Uncharacterized protein | ||||
STRING | Migut.A00430.1.p | 1e-154 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3145 | 22 | 50 |