PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100144300031 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | WRKY | ||||||||
Protein Properties | Length: 218aa MW: 25209.6 Da PI: 9.5261 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 71.3 | 1.3e-22 | 170 | 211 | 1 | 42 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-S CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversa 42 ldDg++WrKYG+K+vk+s++pr+YY+C+ +gCpvkk+ver++ Ote100144300031|100144300031 170 LDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDK 211 59**************************************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.2E-24 | 157 | 211 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.88E-20 | 163 | 211 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 22.974 | 165 | 218 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.5E-18 | 170 | 218 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.7E-17 | 171 | 211 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence Send to blast |
GPSDYYFSHL LVITLKHHLR KFFPHGRKLT KHPTQIHLYI HTYIYTPMPQ NKHSRNDMIM 60 AENYYHNTNI SGASFGSEDS PTPTRGFSHE SGGLDPSDFL QMDDWLDSLQ DDFSSFSHLL 120 NYVPHELEVN SSRASNGGFS EGTMINRGGR EKKGIREKVA FKTKSEIDIL DDGFKWRKYG 180 KKMVKNSPNP RNYYKCSVEG CPVKKRVERD KXXXXXXX |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 4e-17 | 160 | 209 | 7 | 56 | Probable WRKY transcription factor 4 |
2lex_A | 4e-17 | 160 | 209 | 7 | 56 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022882273.1 | 2e-45 | probable WRKY transcription factor 50 isoform X2 | ||||
TrEMBL | A0A0D5YAG4 | 6e-52 | A0A0D5YAG4_SALMI; WRKY protein | ||||
STRING | XP_008220527.1 | 7e-39 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2124 | 24 | 62 |