PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

G2-like

Protein Properties

Length: 274aa MW: 30733.1 Da PI: 6.958

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100142870031	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	61.7	1.4e-19	41	78	1	38
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkv 38 kprl+Wt +LHerF+eav+qLGG+ekAtPk++l+lm++ Ote100142870031\|100142870031 41 KPRLKWTLDLHERFIEAVKQLGGAEKATPKSVLKLMGI 78 79**********************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.0E-15	39	78	IPR009057	Homeodomain-like
SuperFamily	SSF46689	4.66E-6	40	78	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.3E-13	41	80	IPR006447	Myb domain, plants
Pfam	PF14379	6.6E-22	115	160	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence Send to blast
MYHCHHHQGK NVHPVPQEKH MLLQGVTGTG DSGLVLSSDA KPRLKWTLDL HERFIEAVKQ 60 LGGAEKATPK SVLKLMGIXX XXNIVSLEES PSAKADRVLE VNGPHLPNQP TKSLQLDEAI 120 QMQIEVQQRL HEQMEVQRHL QMRIEAQGKY LQDVLEKAQE SLGRQNVGTL GLETAKVQLS 180 ELVSQVSKQS LDSGIKQVSD CCHQQLYEKH LGVKPMTATE QVIDDKQSLS MSIGLEPNAK 240 WNNTIKQDEQ RSCSDLKLPF FPTKLDLQAT SSWI

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that may activate the transcription of specific genes involved in nitrogen uptake or assimilation (PubMed:15592750). Acts redundantly with MYR1 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269\|PubMed:21255164, ECO:0000305\|PubMed:15592750}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by nitrogen deficiency. {ECO:0000269\|PubMed:15592750}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011094327.2	1e-86	myb-related protein 2 isoform X1
Refseq	XP_020553351.1	1e-86	myb-related protein 2 isoform X2
Swissprot	Q9SQQ9	6e-68	PHL9_ARATH; Myb-related protein 2
TrEMBL	A0A4D8ZZ20	1e-104	A0A4D8ZZ20_SALSN; Uncharacterized protein
STRING	VIT_08s0007g07580.t01	5e-80	(Vitis vinifera)
STRING	EOY11198	1e-79	(Theobroma cacao)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2946	24	51

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Nakano Y,Naito Y,Nakano T,Ohtsuki N,Suzuki K NSR1/MYR2 is a negative regulator of ASN1 expression and its possible involvement in regulation of nitrogen reutilization in Arabidopsis. Plant Sci., 2017. 263: p. 219-225 [PMID:28818378]