PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100129910001

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

GRAS

Protein Properties

Length: 327aa MW: 36168.8 Da PI: 9.6551

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100129910001	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	21.3	2.8e-07	212	256	2	46
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayft 46 ++ L+++A a+s+g+ a+++++rl++ a++dg++ qRl+a+++ Ote100129910001\|100129910001 212 KQSLIDAAAAISEGNSPVATEIITRLQQFANSDGSSEQRLTAFMV 256 689***************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence Send to blast
MSSRFSGGGR DFFAAGGRSM NSGYNSNQQQ FPFRSPLSGI VSDPASQIRR PDLIGKRSLA 60 EFQQQGLGFY SRNVKLRPDF QHANPLSPLP SILPEVSNSL NSRYGLPVLH HHRLQPLNIY 120 NRNAIFSPKP AVNLPAPDSE TEKKMMNHRL LELEKELLRD EDDGEAVSGV INSEWSDTIQ 180 NLIAPTQNPI SPSPTXXXXX XXSSTSASPN AKQSLIDAAA AISEGNSPVA TEIITRLQQF 240 ANSDGSSEQR LTAFMVSXXX XXXXXXXXXX XXXSLFDVGP LYQRPQLINP NVIRGLAVFQ 300 AIFHGRQSRH PRRNLGARPS EDSYSGF

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011084446.1	3e-77	scarecrow-like protein 8
TrEMBL	A0A4D9B3L0	1e-82	A0A4D9B3L0_SALSN; Uncharacterized protein
STRING	Migut.F01094.1.p	1e-73	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4023	24	43