PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100124420011
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family NAC
Protein Properties Length: 287aa    MW: 31668.3 Da    PI: 4.4588
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100124420011genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM36.31.7e-11239286248
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp 48 
                                   p+Gf+F P+deel+v++L ++v+++  +++ e+i++++iy++eP++L+
  Ote100124420011|100124420011 239 PAGFKFIPSDEELIVHFLGREVSRSGsHTTLEIIRHANIYEYEPHQLQ 286
                                   89*******************998885566788*************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.01E-10225286IPR003441NAC domain
PROSITE profilePS5100516.068238287IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MDPRFFSLPS SSFNAHSCYA PNSTAVDNHH HSGGGGRNDQ LNFNNPYSCG IISGHRXXXX  60
XXXNNAEIEH GGKEQYLKNM YEYLIVSPDN DMCLDSDVDS SSGDNFWSGL LKHSLAVDNN  120
NSSHSDDNTP SHFGGGGDQL NSNNPHFLES NNNIQQFEYG RNPNPMPHQL QFPAVNEQNP  180
MDFDGGGVDS PLNISSDLLQ DSPPVNSINN VQIGEIPSSS SSSYHFNDDT AAPFVSNIPA  240
GFKFIPSDEE LIVHFLGREV SRSGSHTTLE IIRHANIYEY EPHQLQD