PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100120300101 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | B3 | ||||||||
Protein Properties | Length: 160aa MW: 18008.1 Da PI: 4.8585 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 58.7 | 1.1e-18 | 28 | 117 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81 ffk+ + l s +++p +f++++gg ++t tl+ +sg sW+v +++ ++ ++++GW eFv++n ++++D+++ Ote100120300101|100120300101 28 FFKIYM--PDLCSEKMIIPPDFIDKFGGH--IPRTCTLKVPSGLSWQVDT--TRTNDSWFFQNGWPEFVEDNSIQVRDVLT 102 666663..34555669**********888..6779***************..99999999********************* PP EEE-SSSEE..EEEEE- CS B3 82 Fkldgrsefelvvkvfr 98 F l+g+s+f +vk f+ Ote100120300101|100120300101 103 FCLVGKSTF--TVKTFS 117 ****98988..998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 2.75E-25 | 25 | 121 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 2.6E-23 | 25 | 121 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 5.33E-16 | 26 | 117 | No hit | No description |
PROSITE profile | PS50863 | 12.633 | 26 | 119 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 2.3E-14 | 28 | 119 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 2.7E-16 | 28 | 117 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence Send to blast |
MADVDGRARE RSNVSNEKVA FSDLLPEFFK IYMPDLCSEK MIIPPDFIDK FGGHIPRTCT 60 LKVPSGLSWQ VDTTRTNDSW FFQNGWPEFV EDNSIQVRDV LTFCLVGKST FTVKTFSPNG 120 CMKGGGVENT SKSNESCESE EDSEINGTSG RRQRRMDSRG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012844349.1 | 1e-33 | PREDICTED: B3 domain-containing protein At1g16640-like | ||||
TrEMBL | A0A2G9GXA9 | 1e-39 | A0A2G9GXA9_9LAMI; Uncharacterized protein | ||||
STRING | Migut.M00219.1.p | 6e-33 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12633 | 13 | 20 |