PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100118030031

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

VOZ

Protein Properties

Length: 502aa MW: 55823.8 Da PI: 5.0005

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100118030031	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	417.7	2e-128	228	447	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgip 78 pppsaf+gpkcalwdc+rpa g +w+q dycs +ha la eg pg pv+rp+gi+lkd++lfaal ak+qgk+vgip Ote100118030031\|100118030031 228 PPPSAFMGPKCALWDCPRPALGLDWCQksdDYCSIYHAGLAPSEGYPGRLPVVRPGGISLKDDVLFAALGAKAQGKDVGIP 308 89*********************976668********************************************** PP VOZ 79 ecegaatakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdp 159 ecegaat+kspwna+elfdl++l+getirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm++fgglkrsyymdp Ote100118030031\|100118030031 309 ECEGAATTKSPWNAPELFDLAVLDGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNQFGGLKRSYYMDP 389 ***************************************************************************** PP VOZ 160 qpsssfewhlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 qp+++fewhlyeyein++da+alyrle+k d+kks+kgk+ +ds+adlqk++grlta Ote100118030031\|100118030031 390 QPMENFEWHLYEYEINKYDACALYRLEVKRGDGKKSPKGKLVNDSVADLQKQMGRLTA 447 ******************************************************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence Send to blast
MGKSSKTGAC KSSSHQLFKD RAKNRVDDLQ GVFSDLQSAR KDSRNIDVAV LEEQVQQMLR 60 EWKAELNEPS PASSLQQLWG YYSAFCICPL VDCSNFVLLC EGSLGFSSEI CRLLQLCEEE 120 DDATSALAAP KPDPDAQKAV GGYTSQENFN VPKGAQEQGF QSVDQSKAAA MGVNIEMNNM 180 NMPSQLDYHS FDFHHDFEQL YLMGFDGTGF TAEDVMPQIS GYQPNISPPP SAFMGPKCAL 240 WDCPRPALGL DWCQKSDDYC SIYHAGLAPS EGYPGRLPVV RPGGISLKDD VLFAALGAKA 300 QGKDVGIPEC EGAATTKSPW NAPELFDLAV LDGETIREWL FFDKPRRAFE SGNRKQRSLP 360 DYNGRGWHES RKQVMNQFGG LKRSYYMDPQ PMENFEWHLY EYEINKYDAC ALYRLEVKRG 420 DGKKSPKGKL VNDSVADLQK QMGRLTAEFP NEKQRAVKGR GKTNIKDANA RIYNAPPLPP 480 PAVSPGEAVD YLVDDISGYY LT

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence Send to blast

MGKSSKTGAC KSSSHQLFKD RAKNRVDDLQ GVFSDLQSAR KDSRNIDVAV LEEQVQQMLR  60
EWKAELNEPS PASSLQQLWG YYSAFCICPL VDCSNFVLLC EGSLGFSSEI CRLLQLCEEE  120
DDATSALAAP KPDPDAQKAV GGYTSQENFN VPKGAQEQGF QSVDQSKAAA MGVNIEMNNM  180
NMPSQLDYHS FDFHHDFEQL YLMGFDGTGF TAEDVMPQIS GYQPNISPPP SAFMGPKCAL  240
WDCPRPALGL DWCQKSDDYC SIYHAGLAPS EGYPGRLPVV RPGGISLKDD VLFAALGAKA  300
QGKDVGIPEC EGAATTKSPW NAPELFDLAV LDGETIREWL FFDKPRRAFE SGNRKQRSLP  360
DYNGRGWHES RKQVMNQFGG LKRSYYMDPQ PMENFEWHLY EYEINKYDAC ALYRLEVKRG  420
DGKKSPKGKL VNDSVADLQK QMGRLTAEFP NEKQRAVKGR GKTNIKDANA RIYNAPPLPP  480
PAVSPGEAVD YLVDDISGYY LT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011096373.2	0.0	transcription factor VOZ1, partial
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A4D8ZHY0	0.0	A0A4D8ZHY0_SALSN; Uncharacterized protein
STRING	Migut.M01093.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2818	24	54

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]