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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100118030031 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | VOZ | ||||||||
Protein Properties | Length: 502aa MW: 55823.8 Da PI: 5.0005 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 417.7 | 2e-128 | 228 | 447 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgip 78 pppsaf+gpkcalwdc+rpa g +w+q dycs +ha la eg pg pv+rp+gi+lkd++lfaal ak+qgk+vgip Ote100118030031|100118030031 228 PPPSAFMGPKCALWDCPRPALGLDWCQksdDYCSIYHAGLAPSEGYPGRLPVVRPGGISLKDDVLFAALGAKAQGKDVGIP 308 89***********************976668************************************************** PP VOZ 79 ecegaatakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdp 159 ecegaat+kspwna+elfdl++l+getirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm++fgglkrsyymdp Ote100118030031|100118030031 309 ECEGAATTKSPWNAPELFDLAVLDGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNQFGGLKRSYYMDP 389 ********************************************************************************* PP VOZ 160 qpsssfewhlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 qp+++fewhlyeyein++da+alyrle+k d+kks+kgk+ +ds+adlqk++grlta Ote100118030031|100118030031 390 QPMENFEWHLYEYEINKYDACALYRLEVKRGDGKKSPKGKLVNDSVADLQKQMGRLTA 447 ********************************************************97 PP |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009408 | Biological Process | response to heat | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009631 | Biological Process | cold acclimation | ||||
GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048578 | Biological Process | positive regulation of long-day photoperiodism, flowering | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 502 aa Download sequence Send to blast |
MGKSSKTGAC KSSSHQLFKD RAKNRVDDLQ GVFSDLQSAR KDSRNIDVAV LEEQVQQMLR 60 EWKAELNEPS PASSLQQLWG YYSAFCICPL VDCSNFVLLC EGSLGFSSEI CRLLQLCEEE 120 DDATSALAAP KPDPDAQKAV GGYTSQENFN VPKGAQEQGF QSVDQSKAAA MGVNIEMNNM 180 NMPSQLDYHS FDFHHDFEQL YLMGFDGTGF TAEDVMPQIS GYQPNISPPP SAFMGPKCAL 240 WDCPRPALGL DWCQKSDDYC SIYHAGLAPS EGYPGRLPVV RPGGISLKDD VLFAALGAKA 300 QGKDVGIPEC EGAATTKSPW NAPELFDLAV LDGETIREWL FFDKPRRAFE SGNRKQRSLP 360 DYNGRGWHES RKQVMNQFGG LKRSYYMDPQ PMENFEWHLY EYEINKYDAC ALYRLEVKRG 420 DGKKSPKGKL VNDSVADLQK QMGRLTAEFP NEKQRAVKGR GKTNIKDANA RIYNAPPLPP 480 PAVSPGEAVD YLVDDISGYY LT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011096373.2 | 0.0 | transcription factor VOZ1, partial | ||||
Swissprot | Q9SGQ0 | 0.0 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A4D8ZHY0 | 0.0 | A0A4D8ZHY0_SALSN; Uncharacterized protein | ||||
STRING | Migut.M01093.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2818 | 24 | 54 |
Publications ? help Back to Top | |||
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