PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100110080201 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | Nin-like | ||||||||
Protein Properties | Length: 863aa MW: 96907.6 Da PI: 7.6421 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 91.7 | 5.6e-29 | 580 | 631 | 1 | 52 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i+l++l+++F++++kdAAk+Lgvc+T+LKriCRq+GI+RWP+Rkik++ Ote100110080201|100110080201 580 AEKTITLQVLRQHFAGSLKDAAKSLGVCPTTLKRICRQHGIQRWPSRKIKKV 631 589***********************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 17.109 | 570 | 651 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 2.6E-26 | 583 | 631 | IPR003035 | RWP-RK domain |
SuperFamily | SSF54277 | 2.24E-20 | 774 | 850 | No hit | No description |
PROSITE profile | PS51745 | 22.136 | 774 | 855 | IPR000270 | PB1 domain |
SMART | SM00666 | 3.6E-21 | 774 | 856 | IPR000270 | PB1 domain |
Gene3D | G3DSA:3.10.20.240 | 1.1E-18 | 776 | 850 | No hit | No description |
Pfam | PF00564 | 8.0E-15 | 776 | 850 | IPR000270 | PB1 domain |
CDD | cd06407 | 1.58E-33 | 776 | 850 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 863 aa Download sequence Send to blast |
MEEGMLPLST VLGNTSEALM DFDYMDGLLL DGCWLEANGS EFPHFDSAAP ISPFESSFAW 60 PTLDFNNGEF GGNPSKADQE ERQRSSFSEN LSISQSRGPQ NHRKSEPYVE NITNPVLSSA 120 QCVNYSGEGS EQSKRWWIGP RASMSVMDRL IQALGYMKSC SGNKDVLIQV WVPVTRGGKR 180 VLTTHDQPFS VDLNCPKLAN YREISVKYDF PADEDSKELV GLPGRVYRNK VPEWTPDVQF 240 FSWEEYPRVG HAQQYDVRGT LAVPVLEQGS QNCLGVFEVI LTTQKIQYRP ELESVCKALE 300 AVDLRSPEVS NVHKAKTCDL SYQAALPEIH EVLRTACETH KLPLAQTWVP CILQGNGGCW 360 NTDENLKNCN APVESACYVG DSRIKGFHEA CSEYHLLKGQ GIVGRAFQTN QPCFSTDVSA 420 CSKTDYPLSH YARMFGLKAA VAIRFRSTST GSADFVLEFF LPKDCNNPDD HKKMLTSLSS 480 IIQNVCQTLR VVTDKELKEE AAFVANPVKS ISIEVPRVDR VQFSRASSRQ ASHQETAISP 540 LGQPDSKSKE GMTFAANTST TCDGTSQYTN RTGEKRRVKA EKTITLQVLR QHFAGSLKDA 600 AKSLGVCPTT LKRICRQHGI QRWPSRKIKK VGHSLQKIQH VINSVQGASG GLQIESFYSN 660 FPELASPNAS RTTHFVSLAF LILQSEFQLQ PKLFERCTTK LVLTKRRRTP XXXXXXXXXX 720 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXRDNALP AGDGRGQKPR ERDGPRIKVT 780 CGEDTIRFRM ERNWRFKDLL HEICRRFGVE NGGGYHLKYL DDDAEWVLLT CDADLEECID 840 VCGSSQTIRL TFLHYSIRAP SSL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011074088.1 | 0.0 | protein NLP5-like | ||||
Refseq | XP_011074089.1 | 0.0 | protein NLP5-like | ||||
Refseq | XP_020548089.1 | 0.0 | protein NLP5-like | ||||
Refseq | XP_020548090.1 | 0.0 | protein NLP5-like | ||||
Swissprot | Q9SFW8 | 0.0 | NLP5_ARATH; Protein NLP5 | ||||
TrEMBL | A0A2G9FXJ2 | 0.0 | A0A2G9FXJ2_9LAMI; Uncharacterized protein | ||||
STRING | Migut.N02963.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1598 | 24 | 67 |