 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Ote100108290231 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
| Family |
GRAS |
| Protein Properties |
Length: 251aa MW: 27801.4 Da PI: 6.1549 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ote100108290231 | genome | OteDB | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 235.5 | 2.3e-72 | 1 | 246 | 120 | 374 |
GRAS 120 sqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200
+qGlQWp L++ LasRp+gpp +R+Tg+g+ s+++l++tg+rL++fAe+lg+pfef + +a+++ +l++e+L+++++E
Ote100108290231|100108290231 1 MQGLQWPGLFHILASRPGGPPFVRLTGLGN----STDALQATGKRLSDFAEKLGLPFEFCP-LAEKVGNLNPEKLNISKRE 76
69****************************....9**************************.59***************** PP
GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adh.nsesFlerflealeyysalfdsleaklpre 278
a+aV++ h+l+d ++s ++ +L+l++ +eq +d+ ++sFl rf+ea++yysalfdsl a +++e
Ote100108290231|100108290231 77 AVAVHWLQ--HSLYDVTGSDSN----TLWLLQXXXXXXXXXMEQYqwVDLsHAGSFLGRFVEAIHYYSALFDSLGACYGEE 151
*******9..999999999999....*****************98778886788*************************** PP
GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv 359
seer++vE++ll+rei+nv++ g +r+ + + +++Wre+le++GFk ++l +aa+qa lll +++sdgy++ e++g+l
Ote100108290231|100108290231 152 SEERHVVEQQLLSREIKNVLSVGGPSRIGEVK-FNNWREKLEQCGFKGISLAGNAAAQATLLLGMFPSDGYTLVEDNGALK 231
**************************999987.************************************************ PP
GRAS 360 lgWkdrpLvsvSaWr 374
lgWkd L+++SaWr
Ote100108290231|100108290231 232 LGWKDLCLLTASAWR 246
**************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MQGLQWPGLF HILASRPGGP PFVRLTGLGN STDALQATGK RLSDFAEKLG LPFEFCPLAE 60
KVGNLNPEKL NISKREAVAV HWLQHSLYDV TGSDSNTLWL LQXXXXXXXX XMEQYQWVDL 120
SHAGSFLGRF VEAIHYYSAL FDSLGACYGE ESEERHVVEQ QLLSREIKNV LSVGGPSRIG 180
EVKFNNWREK LEQCGFKGIS LAGNAAAQAT LLLGMFPSDG YTLVEDNGAL KLGWKDLCLL 240
TASAWRPPSL H
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Putative transcription factor involved in asymmetric cell division (By similarity). Required for differentiation of endodermis and graviresponses. {ECO:0000250, ECO:0000269|PubMed:16339910}. |
