PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ote100098020031 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 210aa MW: 23706 Da PI: 6.267 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 41.5 | 2.9e-13 | 14 | 39 | 1 | 26 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsek 26 kprl+Wtp+LH+rFv+av+qLGG+++ Ote100098020031|100098020031 14 KPRLKWTPDLHQRFVDAVKQLGGPDQ 39 79*********************986 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 5.1E-12 | 12 | 96 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 4.0E-8 | 14 | 39 | IPR006447 | Myb domain, plants |
Pfam | PF14379 | 2.2E-20 | 69 | 116 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 210 aa Download sequence Send to blast |
MPQEMKLLLS TDAKPRLKWT PDLHQRFVDA VKQLGGPDQI QTGAKSTIPE TREFGQRRES 60 DNKIFLCSVQ VAKALEMQMD VQRKLQQQIE VQKHLQLRIE AQGKYLQSVL KKAQETLSGY 120 RACSIEVEHA RAQLSQLASM VDCSCTCSIE SSLTSSESSG YNENGKRRCV AEEMNPVXXX 180 XXXXXDIDLN VLNLEIDLNC NGFQLFGSTF |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_021998854.1 | 4e-55 | myb family transcription factor PHL8-like isoform X5 | ||||
Swissprot | F4I274 | 5e-40 | PHL8_ARATH; Myb family transcription factor PHL8 | ||||
TrEMBL | A0A0B0P4F6 | 5e-50 | A0A0B0P4F6_GOSAR; Myb family transcription factor APL | ||||
STRING | Migut.E00086.1.p | 9e-51 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6036 | 19 | 32 |
Publications ? help Back to Top | |||
---|---|---|---|
|