PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100075920071 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 222aa MW: 25368.9 Da PI: 8.5013 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 54.9 | 1.5e-17 | 105 | 159 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q Le+ F+++ ++ +e+ LA++l+L rqV vWFqNrRa+ k Ote100075920071|100075920071 105 RKKLRLSKQQSAFLEDSFKEHTSLNPKEKVALAMRLNLRPRQVEVWFQNRRARTK 159 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 118.3 | 4.2e-38 | 105 | 193 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLe 81 +kk+rlsk+q+++LE+sF+e++ L+p++Kv+la +L+l+prqv+vWFqnrRARtk+kq+E+d+e+L r++++l+een+rL+ Ote100075920071|100075920071 105 RKKLRLSKQQSAFLEDSFKEHTSLNPKEKVALAMRLNLRPRQVEVWFQNRRARTKLKQTEMDCEYLTRCCERLREENTRLQ 185 69******************************************************************************* PP HD-ZIP_I/II 82 keveeLre 89 k+ +eLr+ Ote100075920071|100075920071 186 KQIHELRR 193 ******95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 7.27E-19 | 80 | 162 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.5E-17 | 81 | 162 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 16.698 | 101 | 161 | IPR001356 | Homeobox domain |
SMART | SM00389 | 2.4E-15 | 103 | 165 | IPR001356 | Homeobox domain |
Pfam | PF00046 | 5.4E-15 | 105 | 159 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.63E-14 | 105 | 162 | No hit | No description |
PROSITE pattern | PS00027 | 0 | 136 | 159 | IPR017970 | Homeobox, conserved site |
SMART | SM00340 | 6.3E-16 | 161 | 204 | IPR003106 | Leucine zipper, homeobox-associated |
Pfam | PF02183 | 5.2E-9 | 161 | 192 | IPR003106 | Leucine zipper, homeobox-associated |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence Send to blast |
MELGLILGQT PKALSLEKSI ETDLGFCMAV GRCRETDPLL HLHLHTNNLP FTNFLSLNLL 60 SEEGRRVEKA EEGPSLSSPF STVSSFQMEI SNNLNEPRGN GEASRKKLRL SKQQSAFLED 120 SFKEHTSLNP KEKVALAMRL NLRPRQVEVW FQNRRARTKL KQTEMDCEYL TRCCERLREE 180 NTRLQKQIHE LRRAHNSNSF YMPPTTLTMC PSCQTVDGGA ST |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003520539.1 | 7e-69 | homeobox-leucine zipper protein HOX11 | ||||
Refseq | XP_022864672.1 | 1e-68 | homeobox-leucine zipper protein HOX11-like isoform X2 | ||||
Refseq | XP_028225408.1 | 7e-69 | homeobox-leucine zipper protein HOX11-like | ||||
Swissprot | P46665 | 3e-59 | HAT14_ARATH; Homeobox-leucine zipper protein HAT14 | ||||
TrEMBL | A0A0K2CTA0 | 2e-67 | A0A0K2CTA0_SOYBN; Homeodomain/HOMEOBOX transcription factor (Fragment) | ||||
TrEMBL | A0A445LBK6 | 2e-67 | A0A445LBK6_GLYSO; Homeobox-leucine zipper protein HAT14 | ||||
TrEMBL | I1JNL9 | 2e-67 | I1JNL9_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA03G30200.1 | 3e-68 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA290 | 24 | 186 |