PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100068940051 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | Nin-like | ||||||||
Protein Properties | Length: 241aa MW: 28404.2 Da PI: 6.7177 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 85 | 6.7e-27 | 129 | 179 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++e++le+++kyF+ pi+ AAkeL+v+lTvLK++CR+++I+RWPhRkiksl Ote100068940051|100068940051 129 SSELQLEEIQKYFDFPITRAAKELNVGLTVLKKRCRELNIARWPHRKIKSL 179 5789*********************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 17.473 | 114 | 200 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 7.7E-23 | 132 | 179 | IPR003035 | RWP-RK domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009793 | Biological Process | embryo development ending in seed dormancy | ||||
GO:0005634 | Cellular Component | nucleus |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
MASTENNQNE VGCFFLEEPP PFWSWEQQFA CVEGFNLGLH EYEPFPLGHQ MSIGSNDFED 60 ISGDLWVFDD QPSYQNVSNN VVSTHIPVQE FESNEDIRRR MYDSTHEGCP SLKRNNLEVV 120 RSRYGRQKSS ELQLEEIQKY FDFPITRAAK ELNVGLTVLK KRCRELNIAR WPHRKIKSLN 180 SLIHNVKELG LANEIEMLEE HKKMVERIPE MELTERTKKL RQACFKANYK KRRSLQHQVF 240 P |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012858066.1 | 2e-75 | PREDICTED: protein RKD4 | ||||
TrEMBL | A0A2G9HV85 | 2e-92 | A0A2G9HV85_9LAMI; Uncharacterized protein | ||||
STRING | Migut.F01022.1.p | 5e-63 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12143 | 19 | 22 |