PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100057820241

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

TCP

Protein Properties

Length: 321aa MW: 34950.4 Da PI: 7.3226

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100057820241	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	53.3	1.1e-16	44	168	1	131
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........ssssasec 73 a+g+kdrhsk+ T++g+RdRR d+LG+d++sk++eWLl +a +i el+ + +s++++ Ote100057820241\|100057820241 44 ATGGKDRHSKVLTSRGLRDRR---------------DRLGYDQPSKAVEWLLSAAANSIAELPPMnspfplisDRPSEKKM 109 5899***************...............89***********************6777666433333444 PP TCP 74 eaesssssasnsssgkaaksaakskksqksaasalnlak.esrakarararertrekmr 131 +a+s ++ + + + aks+ s++s++s+ s l++++ +sr +ar+ra+er e+ + Ote100057820241\|100057820241 110 TAASGADQSMTLHVSTVAKSSVGSSSSENSKGSGLSISRsDSRIRARERAKERVLEREK 168 555555555555555777788888888999998999999999*****9998766554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	3.7E-16	46	168	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	8.558	47	90	IPR017887	Transcription factor TCP subgroup
PROSITE profile	PS51370	8.863	149	168	IPR017888	CYC/TB1, R domain

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence Send to blast
MENDEDEGTN RRSNSNAGGA ADPGGAIGGL YGWPSSRIVR VSRATGGKDR HSKVLTSRGL 60 RDRRDRLGYD QPSKAVEWLL SAAANSIAEL PPMNSPFPLI SDRPSEKKMT AASGADQSMT 120 LHVSTVAKSS VGSSSSENSK GSGLSISRSD SRIRARERAK ERVLEREKEN EEEFPSFSEL 180 RITNENSEQS AFYQRFPMDY LSSSLSSPPV TASPTPVAAP LLFTAAAEHH TELQPFSFTS 240 DHMVSSVNAA NPSAINRGTL QSNSSSLPSL QFPQNFFTGA ATPTGNHHQF FPELDDRLQL 300 YYGNAYGNEG RHSEPKRKEK P

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012842244.1	2e-80	PREDICTED: transcription factor TCP2-like isoform X1
Refseq	XP_012842245.1	1e-80	PREDICTED: transcription factor TCP2-like isoform X2
TrEMBL	A0A022QZI8	5e-81	A0A022QZI8_ERYGU; Uncharacterized protein
STRING	Migut.M00891.1.p	4e-80	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2464	22	52