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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100046530161 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | WRKY | ||||||||
Protein Properties | Length: 294aa MW: 33453.9 Da PI: 5.1968 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 75.8 | 5.1e-24 | 129 | 185 | 6 | 59 |
-EEEEEEE-...-TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 6 nWrKYGqKe...vkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +WrKYGqK ++ f+rsYYrCts++C vkk+vers++dp++v++tYeg+H+h+ Ote100046530161|100046530161 129 QWRKYGQKAraaMNRFSFSRSYYRCTSTSCGVKKRVERSSDDPTIVVTTYEGTHTHP 185 7*******6333666789**************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 8.7E-22 | 127 | 187 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 6.54E-20 | 127 | 187 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.9E-19 | 129 | 185 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.4E-22 | 129 | 186 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 20.61 | 129 | 187 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence Send to blast |
MEEKQKESTE RENSTEKIAF SDEMMIPENS VFDISCEHKS SSFRFTDMLS VQDFTNPSSS 60 SSSIFDDLLQ NIASPFPAPE YSEVVNTPAT PNSSSVSSSS TETAANDDHK RHHQDEDQEP 120 DQENTTNKQW RKYGQKARAA MNRFSFSRSY YRCTSTSCGV KKRVERSSDD PTIVVTTYEG 180 THTHPCPLTP RGTFAVMPET TMLHHGSHFG MIPQIMYQQL TPQPMQQHQH QPYFHNLLTP 240 PLNFTTANTN TALFPPLFQE RRFCPPASST ARDDGLLQDM LPSEMFKSRT EEEE |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 3e-14 | 129 | 187 | 22 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 3e-14 | 129 | 187 | 22 | 77 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011100744.2 | 2e-68 | probable WRKY transcription factor 48, partial | ||||
TrEMBL | A0A2G9I0G1 | 3e-91 | A0A2G9I0G1_9LAMI; Uncharacterized protein | ||||
STRING | Migut.N00035.1.p | 4e-65 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1309 | 24 | 79 |