PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100033260101
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family G2-like
Protein Properties Length: 297aa    MW: 33006.1 Da    PI: 7.783
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100033260101genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.62.1e-31198253156
                       G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                                   k+r++W+peLH+ Fv+a+++LGG+e AtPk+i+elmkv+gLt+++vkSHLQkYR++
  Ote100033260101|100033260101 198 KQRRCWSPELHKIFVDALHKLGGAETATPKQIRELMKVDGLTNDEVKSHLQKYRIH 253
                                   79****************************************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.99195255IPR017930Myb domain
Gene3DG3DSA:1.10.10.606.8E-29195256IPR009057Homeodomain-like
SuperFamilySSF466891.22E-18196256IPR009057Homeodomain-like
TIGRFAMsTIGR015578.3E-26198253IPR006447Myb domain, plants
PfamPF002492.0E-8200251IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MNFDLGSDSS SKNISDILRD VPIVDEFSKK SMNLGFHVHA LEEEMKKIEA FKRELPHCMH  60
LLRDAIERLK EESGREEVSV MGNYGEGDGR AKTSNDIIEK KNWMSSVQLC TPVSRNQDSV  120
FHLRARFVEE GEGSGGGNSK GRAFLPFKRA SGDVVEKQGT AAIDKLSLAV PEAPSELTLN  180
GFGRGKMEQP HQHEQQKKQR RCWSPELHKI FVDALHKLGG AETATPKQIR ELMKVDGLTN  240
DEVKSHLQKY RIHIKRVDRA GGSHSGSPQG PLQGSKAAKG VDDEDDGKSE SHGWKTN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A1e-14198251154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-14198251154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-14198251154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-14198251154Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022853650.13e-91transcription factor HHO5-like isoform X1
TrEMBLA0A022RHZ18e-77A0A022RHZ1_ERYGU; Uncharacterized protein
STRINGMigut.K00828.1.p1e-77(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA84972229