PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100028510051
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WRKY
Protein Properties Length: 306aa    MW: 34149 Da    PI: 4.7625
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100028510051genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.81.1e-28115176159
                                   ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                   ldDgynWrKYGqK++ g+ +pr+YYrCt++   gC ++k+v+r+++dp v+e++Y+g+H ++
  Ote100028510051|100028510051 115 LDDGYNWRKYGQKDILGAVHPRAYYRCTHRntqGCLATKQVQRADDDPAVFEVVYRGKHSCR 176
                                   59***************************98889*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.4E-28105177IPR003657WRKY domain
PROSITE profilePS5081123.445110174IPR003657WRKY domain
SuperFamilySSF1182901.96E-25114177IPR003657WRKY domain
SMARTSM007745.0E-40115177IPR003657WRKY domain
PfamPF031061.5E-26116176IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MVKVGVSNKR SVITVLTEGK KLADELKRQL LATTASKESC DVLVESILSS YENAIKVLAL  60
VGNGGSSQIL SEPPNSVVGS PTSEGSDQNC KKRKTLPRWV EQVRVCSETG SEGQLDDGYN  120
WRKYGQKDIL GAVHPRAYYR CTHRNTQGCL ATKQVQRADD DPAVFEVVYR GKHSCRQERL  180
KQNELKNEEE KMVDSLIKTE NTELVSKEEH SPSFSFPSTP IDYQSVEPQF FADTTDNFIT  240
TSYSPSFLSP ATSDFGIGHS LQTSDSDFGE IISNPTHILD FPLRDLDLSI DAEDFECHFL  300
DAFDYL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A5e-22115176869OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093555.11e-128probable WRKY transcription factor 41
TrEMBLA0A4D8XSZ51e-144A0A4D8XSZ5_SALSN; Uncharacterized protein
STRINGMigut.B01847.1.p1e-101(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55532237