PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100020890031 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | Trihelix | ||||||||
Protein Properties | Length: 182aa MW: 21586.2 Da PI: 8.7143 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 28.1 | 5.3e-09 | 9 | 39 | 30 | 60 |
trihelix 30 lWeevskkmrergferspkqCkekwenlnkr 60 We+vs+k++e gf+rs ++Ckek+e+ + Ote100020890031|100020890031 9 TWEHVSRKLAELGFKRSGEECKEKFEEESSS 39 7************************987655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence Send to blast |
MEIWFPDFTW EHVSRKLAEL GFKRSGEECK EKFEEESSSH FHQNKSYRIL SELDEFYHAH 60 XXXXXXXXXX XXXXDEVDQV RVEKEDAAMN PKPPTKKRKR RGEKLEMLKG FCEAVVKTMM 120 AKQEELHQKL LHDIIKRDEX XXXXXXXXXX XXXXWTASKP RSKSDPKSRN PPLRDRPPSS 180 TS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011078730.1 | 1e-37 | trihelix transcription factor GTL2 | ||||
TrEMBL | A0A2R6QLD8 | 3e-32 | A0A2R6QLD8_ACTCH; Trihelix transcription factor | ||||
TrEMBL | A0A438IH09 | 2e-32 | A0A438IH09_VITVI; Trihelix transcription factor GTL2 | ||||
STRING | VIT_14s0030g01860.t01 | 1e-32 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13700 | 10 | 13 |