PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Ote100018490031

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

NAC

Protein Properties

Length: 540aa MW: 60482.8 Da PI: 4.1849

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100018490031	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	58.2	2.8e-18	2	53	1	53
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka 53 l+pGfrFhPtdeelv +yL++kv gk +++ ++i+++diyk+ePwdLpk + Ote100018490031\|100018490031 2 LAPGFRFHPTDEELVRYYLRRKVCGKGFRF-HAISDIDIYKAEPWDLPKVWQW 53 579***********************99.88*************63332 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	4.45E-30	2	135	IPR003441	NAC domain
PROSITE profile	PS51005	29.607	2	135	IPR003441	NAC domain
Pfam	PF02365	4.0E-11	4	112	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 540 aa Download sequence Send to blast
MLAPGFRFHP TDEELVRYYL RRKVCGKGFR FHAISDIDIY KAEPWDLPKV WQWSKDQQSY 60 RKRVLEDDRK GQGCLPQIAD CWDEEDSCIX XXXXGRAPKG QRTNWVMHEY RLADLELERA 120 GILQDAFVLC RVFQKSGSGP KNGEQYGAPF MEEEWLDDES EIVPKAETVE VVDFGDDAYL 180 DGDDLDQILG SDVPSVDSPI PSNFRPADGS SIEETAESVN DDPKPLLNAG DQYHEPKQHE 240 DKNLYDFPAP YETDVRTVKR EFIGESSKSD NFDELDFLLD EPCQDSNDVP FQDIADGTPY 300 GNVGFIQASD LSHPVDTNIS PIDTLEDFLT FYDANVDNPQ DFEYDPLTML ESEDLIPSQS 360 ILPPEEPKVE GEHSTLPSGP SLDKNDDDGA STSDKLDSSK YESDFQYPFL RHASQMLGSI 420 PAPPALASDF PSKDALHRLN SLSQPSTSVH VTAGMIQIRN LTTDGIGRDH SLGKPWNLNI 480 SISFGFSRGV DGSARLESSL SLIPGKALAS TLSRGWFYFM LFWVLVLSIS YKIGCCVCAK

Sequence ? help Back to Top

Protein Sequence Length: 540 aa Download sequence Send to blast

MLAPGFRFHP TDEELVRYYL RRKVCGKGFR FHAISDIDIY KAEPWDLPKV WQWSKDQQSY  60
RKRVLEDDRK GQGCLPQIAD CWDEEDSCIX XXXXGRAPKG QRTNWVMHEY RLADLELERA  120
GILQDAFVLC RVFQKSGSGP KNGEQYGAPF MEEEWLDDES EIVPKAETVE VVDFGDDAYL  180
DGDDLDQILG SDVPSVDSPI PSNFRPADGS SIEETAESVN DDPKPLLNAG DQYHEPKQHE  240
DKNLYDFPAP YETDVRTVKR EFIGESSKSD NFDELDFLLD EPCQDSNDVP FQDIADGTPY  300
GNVGFIQASD LSHPVDTNIS PIDTLEDFLT FYDANVDNPQ DFEYDPLTML ESEDLIPSQS  360
ILPPEEPKVE GEHSTLPSGP SLDKNDDDGA STSDKLDSSK YESDFQYPFL RHASQMLGSI  420
PAPPALASDF PSKDALHRLN SLSQPSTSVH VTAGMIQIRN LTTDGIGRDH SLGKPWNLNI  480
SISFGFSRGV DGSARLESSL SLIPGKALAS TLSRGWFYFM LFWVLVLSIS YKIGCCVCAK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011076897.1	0.0	NAC domain-containing protein 53 isoform X1
TrEMBL	A0A2G9I3Z2	0.0	A0A2G9I3Z2_9LAMI; Uncharacterized protein
STRING	Migut.F01913.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3141	24	50