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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100015450131 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | Nin-like | ||||||||
Protein Properties | Length: 207aa MW: 24227.5 Da PI: 7.5691 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 81.4 | 9e-26 | 71 | 120 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++s e++skyF++pi +AAkeL+++lT+LK++CR++GIkRWPhRk+ sl Ote100015450131|100015450131 71 RKLSRETISKYFYMPISEAAKELKMGLTLLKKRCRELGIKRWPHRKLISL 120 6899******************************************9886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 17.734 | 56 | 140 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 5.4E-21 | 73 | 120 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence Send to blast |
DYAAWDFHLD QFKETDLYPL SFVDILPNDP PEGFSSSEFG GGKDEKMGSC NSEVEHESAM 60 AEKKLEEKDS RKLSRETISK YFYMPISEAA KELKMGLTLL KKRCRELGIK RWPHRKLISL 120 QTLINNVKEM RQEGENVREA LQNLENEKRL LEEVPDIELE RGTKRLRQVY FKANYKRRMM 180 MNRNGTPLFD STNKAHQNTQ VSGDFKE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027916083.1 | 1e-49 | protein RKD1-like | ||||
Swissprot | Q9M9U9 | 2e-43 | RKD1_ARATH; Protein RKD1 | ||||
TrEMBL | A0A4D6KWW0 | 3e-48 | A0A4D6KWW0_VIGUN; Uncharacterized protein | ||||
STRING | XP_007155308.1 | 1e-47 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4274 | 21 | 42 |