PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100015360061 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | GATA | ||||||||
Protein Properties | Length: 132aa MW: 14701.2 Da PI: 10.8143 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 57.5 | 1.9e-18 | 29 | 63 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs C+tt TplWR gp g+k+LCnaCG++y kk++ Ote100015360061|100015360061 29 CSDCHTTRTPLWRGGPAGPKSLCNACGIKYNKKRR 63 ********************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50114 | 12.545 | 23 | 58 | IPR000679 | Zinc finger, GATA-type |
SMART | SM00401 | 9.8E-12 | 23 | 81 | IPR000679 | Zinc finger, GATA-type |
SuperFamily | SSF57716 | 1.05E-12 | 27 | 63 | No hit | No description |
Gene3D | G3DSA:3.30.50.10 | 2.8E-15 | 28 | 63 | IPR013088 | Zinc finger, NHR/GATA-type |
CDD | cd00202 | 1.92E-12 | 28 | 79 | No hit | No description |
Pfam | PF00320 | 2.9E-16 | 29 | 63 | IPR000679 | Zinc finger, GATA-type |
PROSITE pattern | PS00344 | 0 | 29 | 54 | IPR000679 | Zinc finger, GATA-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0008270 | Molecular Function | zinc ion binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence Send to blast |
MMFASSVSFS QKADFEEKNS GISSPLKTCS DCHTTRTPLW RGGPAGPKSL CNACGIKYNK 60 KRRQLLGLDT GKPNKKKKRT SVVRSNEVRE ILKMRFKSDV VLQRSGKLMS KLREEERAAI 120 LLMALSCGSV YA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011079598.1 | 4e-68 | GATA transcription factor 15 | ||||
TrEMBL | A0A4D8ZJQ9 | 2e-74 | A0A4D8ZJQ9_SALSN; Uncharacterized protein | ||||
STRING | Migut.D00108.1.p | 7e-65 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8503 | 22 | 29 |