PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100010740172

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

G2-like

Protein Properties

Length: 441aa MW: 49517 Da PI: 6.0691

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100010740172	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.1	2e-33	241	295	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fveav++LGGse+AtPk +l+lmk +gLt++hvkSHLQkYR+ Ote100010740172\|100010740172 241 KQRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKAEGLTIYHVKSHLQKYRT 295 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	13.313	238	298	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.2E-30	239	297	IPR009057	Homeodomain-like
SuperFamily	SSF46689	2.69E-17	239	295	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.2E-24	241	295	IPR006447	Myb domain, plants
Pfam	PF00249	2.6E-10	243	294	IPR001005	SANT/Myb domain
Pfam	PF14379	4.1E-24	326	372	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence Send to blast
VTGHKLKLLG SYHRRWELNQ LYLFKDRGNR PNFSDSHQVS LGRVFNQRLP ATLPSNSGVV 60 GHIYSSSSGF SSDLHFSSVQ QQEKHPKQSP FISQSTNSKS FDLVQHSTDS GYLQSTASSH 120 SNKDNMNSWC TDALPEFFDF QNSQLDVGNS VAVVAPSEDL CKPSEWQDWA DNLITEDDAL 180 TSDWNDILTD ANTLDPDLKL MSKPSTCISM QPQVAQQLPA TYRETISAFG QSSSTNTAPA 240 KQRMRWTPEL HEAFVEAVNK LGGSERATPK GVLKLMKAEG LTIYHVKSHL QKYRTARYKP 300 ESTEESSERK TTSIDQLSSL DLKTGIEITE ALRLQMEVQK RLHEQLEIQR NLQLRIEEQG 360 RCLQMMFEKQ YKAGPEWLKG GSSTAENALK ELTDIDQKPP PKDNSVAEAD KSNTEGDSAE 420 VLENSSAKVE EQPLKRARVH D

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence Send to blast

VTGHKLKLLG SYHRRWELNQ LYLFKDRGNR PNFSDSHQVS LGRVFNQRLP ATLPSNSGVV  60
GHIYSSSSGF SSDLHFSSVQ QQEKHPKQSP FISQSTNSKS FDLVQHSTDS GYLQSTASSH  120
SNKDNMNSWC TDALPEFFDF QNSQLDVGNS VAVVAPSEDL CKPSEWQDWA DNLITEDDAL  180
TSDWNDILTD ANTLDPDLKL MSKPSTCISM QPQVAQQLPA TYRETISAFG QSSSTNTAPA  240
KQRMRWTPEL HEAFVEAVNK LGGSERATPK GVLKLMKAEG LTIYHVKSHL QKYRTARYKP  300
ESTEESSERK TTSIDQLSSL DLKTGIEITE ALRLQMEVQK RLHEQLEIQR NLQLRIEEQG  360
RCLQMMFEKQ YKAGPEWLKG GSSTAENALK ELTDIDQKPP PKDNSVAEAD KSNTEGDSAE  420
VLENSSAKVE EQPLKRARVH D

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	1e-31	240	299	1	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	1e-31	240	299	1	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	1e-31	240	299	1	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	1e-31	240	299	1	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	1e-31	240	299	1	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	1e-31	240	299	1	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	1e-31	240	299	1	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	1e-31	240	299	1	60	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011083055.1	0.0	protein PHOSPHATE STARVATION RESPONSE 1
Refseq	XP_011083057.1	0.0	protein PHOSPHATE STARVATION RESPONSE 1
Refseq	XP_020550432.1	0.0	protein PHOSPHATE STARVATION RESPONSE 1
TrEMBL	A0A4D9BR41	0.0	A0A4D9BR41_SALSN; Uncharacterized protein
STRING	Migut.D00466.1.p	1e-179	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2753	23	49