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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ote100005090021 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family |
MYB_related |
Protein Properties |
Length: 195aa MW: 22509.2 Da PI: 5.3672 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ote100005090021 | genome | OteDB | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 56.6 | 5.8e-18 | 22 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T+eE+e +++++++lG++ W++Ia++++ gRt++++k+ w+++l
Ote100005090021|100005090021 22 RGNFTKEEEEAIINLHHMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 67
89********************.*********.************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 195 aa
Download sequence Send
to blast |
LLRCGKSCRL RWINYLKPDI KRGNFTKEEE EAIINLHHML GNRWSAIAAR LPGRTDNEIK 60 NVWHTHLKKK LKNNESSQDS KGHSIMSINS KCDNKDNFDT IVTTSPQRCS SEMSSLTDSS 120 TEKVAVKKEE VDYSSQYFPM MESFWSGDVT EMNREVDANV PLMENVDDSK VDDSSMDFWY 180 NLFIRAGDMP DLPEF
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Functional Description ? help
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Source |
Description |
UniProt | Acts as negative regulator of cold tolerance. Negatively regulates beta-amylase genes at the transcriptional level in response to cold stress. Suppresses beta-amylase gene expression by interacting with TIFY11A/JAZ9. Maltose produced by beta-amylases has a role in protecting cell membranes under cold stress conditions in rice and may contribute to the cold tolerance as a compatible solute. {ECO:0000269|PubMed:28062835}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by cold stress and flooding. {ECO:0000269|PubMed:28062835}. |